CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35227	Soybean	plasma membrane	97.42	97.42
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	86.37	86.62
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	85.22	85.47
VIT_02s0025g04540.t01	Wine grape	extracellular	81.92	81.81
Solyc08g080200.2.1	Tomato	unclear	77.19	80.06
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	79.91	79.91
PGSC0003DMT400032620	Potato	mitochondrion	79.05	79.39
Solyc08g007800.2.1	Tomato	unclear	75.61	78.77
CDX93857	Canola	endoplasmic reticulum, extracellular	10.62	78.72
Solyc12g056440.1.1	Tomato	unclear	78.62	78.62
CDY10843	Canola	mitochondrion	77.19	77.41
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	77.62	77.29
CDY41259	Canola	mitochondrion	77.47	77.14
Bra013668.1-P	Field mustard	mitochondrion	77.19	76.86
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.61	76.61
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	28.12	76.26
AT4G11810.1	Thale cress	plasma membrane	77.33	76.24
CDY13281	Canola	cytosol, peroxisome, plasma membrane	76.76	75.99
CDX86744	Canola	cytosol, peroxisome, plasma membrane	76.61	75.85
CDY45470	Canola	mitochondrion	74.75	75.07
CDY66560	Canola	cytosol, mitochondrion, nucleus, peroxisome	75.18	74.64
CDY45970	Canola	mitochondrion	74.46	74.46
Bra027004.1-P	Field mustard	mitochondrion	74.32	74.32
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	74.75	74.22
CDY64893	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	74.75	74.22
GSMUA_Achr11P...	Banana	cytosol	73.74	73.74
GSMUA_Achr1P18870_001	Banana	cytosol	73.6	73.39
KXG19184	Sorghum	cytosol	73.46	73.25
Os06t0129400-02	Rice	plasma membrane	73.31	73.21
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	74.17	73.02
Zm00001d036020_P002	Maize	cytosol	73.03	72.82
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	72.02	71.71
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	71.88	71.57
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	71.45	71.14
Os02t0678200-01	Rice	plasma membrane	70.73	70.73
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	71.02	70.31
OQU82184	Sorghum	cytosol	70.16	70.26
EES07458	Sorghum	cytosol	70.01	70.11
Zm00001d017597_P001	Maize	cytosol	69.44	69.94
HORVU6Hr1G065710.13	Barley	cytosol	69.87	69.77
TraesCS6D01G238500.1	Wheat	cytosol	69.3	69.6
Os04t0573000-01	Rice	plasma membrane	69.44	69.54
TraesCS6B01G267800.1	Wheat	cytosol	69.15	69.45
TraesCS6A01G257300.1	Wheat	cytosol	69.3	69.2
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	68.72	68.72
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	68.58	68.58
TraesCS7D01G058400.1	Wheat	cytosol	70.3	68.44
CDX71233	Canola	nucleus	13.49	68.12
TraesCS2D01G396700.1	Wheat	nucleus	68.29	68.0
HORVU2Hr1G094690.1	Barley	cytosol	68.58	67.99
TraesCS2A01G399200.1	Wheat	nucleus	68.15	67.86
TraesCS2B01G417200.1	Wheat	nucleus	68.15	67.86
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	69.3	67.65
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	72.74	66.19
TraesCS5B01G310500.1	Wheat	cytosol	63.27	63.64
TraesCS5A01G309800.1	Wheat	cytosol	63.13	63.49
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	63.13	63.4
HORVU5Hr1G080250.1	Barley	cytosol	62.84	63.11
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	56.53	62.15
Os09t0521800-00	Rice	cytosol, peroxisome	60.98	61.59
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	51.08	59.63
GSMUA_AchrUn_...	Banana	cytosol	20.66	54.55

Protein Annotations

EntrezGene:100805436	MapMan:24.2.2.2.3	EMBL:ACUP02012692	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G163400	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR004331
InterPro:IPR020846	UniProt:K7N3U7	EnsemblPlants:KRG91596	ProteinID:KRG91596	ProteinID:KRG91596.1	ProteinID:KRG91597.1
ProteinID:KRG91598.1	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105	PFAM:PF07690
PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000233D8EE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:40089645..40095212

Molecular Weight (calculated)

78863.8 Da

IEP (calculated)

6.982

GRAVY (calculated)

0.158

Length

697 amino acids

Sequence
(BLAST)

001: MVAFGKKLKE RQIQEWQRYY INYKLMKKRV KQYAQQIQLG TLDRRHVLKD FSRMLDNQIE KTVLFLLEQQ GLLASRIAKL GEEHEVIQQE PHISRIAELR
101: EAYRAVGQEL LKLLFFVEVN AVGLRKILKK FDKRFGYKFT DYYVKTRANH PYSQLQQVFK HVGFGAVVGA LSRNLHELQE NQESQGSFLS IYDQPTLPLQ
201: DPVIDSIRAA IDRLSNSTNF LNFLGQHALI MHEELPAPVD EHVDDQRYHF MSLFLNLANT FLYMVNTYII VPTADDYSMS LGAAPTVCGI VIGAMAVAQV
301: FSSVYFSAWS NKSYFRPLVF SSIVLFLGNV MYALAYDLNS IWILIIGRLL CGFGSARAVN RRYISDCVPL KIRMQASAGF VSASALGMAC GPALAGLLQT
401: KFKIFNITFN QDTLPGWVMT IAWLIYLVWL WITFKEPYRE IEENHVPHQS NAENNALEKG IKQPLLTSLK DKVDEDDDQD YDDSEEAPED SRQPANSIGA
501: AYRLLTPSVK VQLLIYFMLK YAMEILLSES SVITTYYFNW TTSTVSIFLA CLGLTVLPVN IIVGSYISNM FEDRQILLAS EVMVFVGILF SFHVIFPYTE
601: PQYICSGLLM FVSAEVLEGV NLSLLSRVMS SRLSRGTYNG GLLSTEAGTL ARVIADATIT LAGYGGVSRL LNVTLFPSFF ICVASIIATC YTYNSLY

Best Arabidopsis Sequence Match ( AT4G11810.2 )
(BLAST)

001: MVAFGKKLKE RSIEEWQEYY INYKLMKKKV KQYGPQIEVG SLDRRHVLKD FSRMLDHQIE KIALFMLEQQ GLLSSRLQKL REWHDTLQDE PDLSQIAKLR
101: EAYRAVGQDL LKLLFFIDMN AIGIRKILKK FDKRFGYRFT NYYVKTRADH PYSQLQQVFR HVGLGAVVGA ISRNLHELQN NEGSYLSIYD QPVLPLQDPV
201: VDSIKNAVDR LTHSTNFLNF MAQHALIMQD DEDLLMLPPD EQAEKEEGRY HFMSLLLNLA NTFLYMVNTY IIVPTADDYS MSLGAAATVC GVVIGAMAVA
301: QLFSSVYFSA WSNKSYFKPL IFSSIVLFFG NLLYALAYDF NSLALLLIGR LFCGFGSARA VNRRYISDCV PLKIRMQASA GFVSASALGM ACGPALAGLL
401: QTDFKIKNVT FNQDTLPGWV MAVAWLLYLV WLAISFREPA REPEEIHTSQ ESTSADQDGN IEKGLKKPLL LASEETEHDE EDDGDGSEES SDDSRKPANS
501: FVAAYKLLTP SVKVQLLIYF MLKYAMEILL SESSVVTTYY FGWSMSSVSI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LASEIMVCIG IVLSFHVVIP
601: YTVPQYVISG FIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITLAGFLGQ SMLLNVTLLP SLIICVLSIL ATCYTYNSLY

Arabidopsis Description

SPX domain-containing membrane protein At4g11810 [Source:UniProtKB/Swiss-Prot;Acc:Q9T050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.