CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 3
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013668.1-P	Field mustard	mitochondrion	99.43	99.43
CDY10843	Canola	mitochondrion	95.86	96.55
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	90.0	90.0
CDX86744	Canola	cytosol, peroxisome, plasma membrane	81.86	81.39
CDY13281	Canola	cytosol, peroxisome, plasma membrane	81.86	81.39
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	79.0	79.57
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	78.71	79.28
VIT_02s0025g04540.t01	Wine grape	extracellular	78.86	79.08
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	77.86	78.19
Solyc08g080200.2.1	Tomato	unclear	75.0	78.12
PGSC0003DMT400032620	Potato	mitochondrion	77.29	77.95
CDX93857	Canola	endoplasmic reticulum, extracellular	10.43	77.66
KRG91596	Soybean	mitochondrion	77.14	77.47
Solyc08g007800.2.1	Tomato	unclear	74.0	77.43
KRH35227	Soybean	plasma membrane	76.71	77.04
Solyc12g056440.1.1	Tomato	unclear	76.57	76.9
CDY45470	Canola	mitochondrion	75.86	76.51
CDY45970	Canola	mitochondrion	76.14	76.47
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	28.0	76.26
CDY66560	Canola	cytosol, mitochondrion, nucleus, peroxisome	75.86	75.64
CDY64893	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	75.57	75.36
CDX73315	Canola	mitochondrion	13.0	70.0
CDY28410	Canola	golgi, nucleus, plasma membrane	47.71	67.89
CDX71233	Canola	nucleus	13.14	66.67
CDY41366	Canola	extracellular, golgi	12.71	55.97

Protein Annotations

MapMan:24.2.2.2.3	GO:A0A078HV76	UniProt:A0A078HV76	EnsemblPlants:CDY41259	ProteinID:CDY41259	ProteinID:CDY41259.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00072683001	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	InterPro:SPX_dom
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EE8897	SEG:seg	:	:

Description

BnaA01g12800DBnaA01g12800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV76]

Coordinates

chrLK032494:+:104652..108671

Molecular Weight (calculated)

78383.3 Da

IEP (calculated)

6.365

GRAVY (calculated)

0.204

Length

700 amino acids

Sequence
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV NQYGRQLQGG NLERRQVLKD FSKMLDNQIE KVALFMLEQQ GLLASRLQRL RESHDALQEE PEISHIAYLK
101: DGYRAVGHDL LKLLFFVEMN AIGVRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVYK HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTHSTNFLNF MAQHAFIMQQ ELPSPQDEEE AVEEDKRYHF MSLLLNLVNT FLYMVNTYII VPTADDYSMS LGAAATVCGV VIGAMAVAQL
301: FSSVYFSAWS NKSYFKPLIF SSIVLFIGNL LYALAFDFNS IAVLLIGRLF CGLGSARAVN RRYISDCVPL KIRMQASAGF VSASALGMAC GPALAGLLQT
401: KFKIYKLTFN QNTLPGWVMA IAWLMYLVWL AISFREPVLE PEESHSTSKD SNNSEAVQDG NLESGIKQPL LITSEEIEEQ IEDEDDSEEA SEESRAPVNS
501: IGAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVVTTYY FGWSTSSVAI FLACLGLTVL PVNIVIGSYI SNMFEDRQIL LVSEIMVCVG ILFSFNVLVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADV TITVAGYFGR DMLLNVTLLP SLVTCVVSIV ATCFTYNSLY

Best Arabidopsis Sequence Match ( AT4G22990.2 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSEAVQDVN LEKGMKQPLL LTSEEIEEQG EDECDGSEEA SEDSRTPANS
501: ILAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITTYY FGWSTSSVAI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LVSEIMVCVG ILLSFHVVVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITVAGFFGR NMLLNVTLLP SLVICVLSIV ATCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.