Factsheet for VIT_02s0025g04540.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	83.81	84.17
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	83.67	83.79
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	83.38	83.74
Solyc12g056440.1.1	Tomato	unclear	83.38	83.5
Solyc08g080200.2.1	Tomato	unclear	80.37	83.48
PGSC0003DMT400032620	Potato	mitochondrion	81.95	82.42
KRG91596	Soybean	mitochondrion	81.81	81.92
Solyc08g007800.2.1	Tomato	unclear	78.37	81.76
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	30.09	81.71
KRH35227	Soybean	plasma membrane	81.52	81.64
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	80.52	80.29
CDX93857	Canola	endoplasmic reticulum, extracellular	10.74	79.79
CDY10843	Canola	mitochondrion	78.65	78.99
VIT_15s0048g01090.t01	Wine grape	cytosol	78.65	78.88
CDY41259	Canola	mitochondrion	79.08	78.86
Bra013668.1-P	Field mustard	mitochondrion	78.94	78.71
AT4G11810.1	Thale cress	plasma membrane	79.08	78.08
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	77.94	78.05
CDY13281	Canola	cytosol, peroxisome, plasma membrane	78.37	77.7
CDY66560	Canola	cytosol, mitochondrion, nucleus, peroxisome	77.79	77.35
CDX86744	Canola	cytosol, peroxisome, plasma membrane	77.94	77.27
CDY64893	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	77.51	77.07
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	77.51	77.07
CDY45970	Canola	mitochondrion	76.79	76.9
Bra027004.1-P	Field mustard	mitochondrion	76.79	76.9
CDY45470	Canola	mitochondrion	76.36	76.8
GSMUA_Achr11P...	Banana	cytosol	75.79	75.9
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	76.5	75.42
GSMUA_Achr1P18870_001	Banana	cytosol	75.36	75.25
Os06t0129400-02	Rice	plasma membrane	75.07	75.07
Zm00001d036020_P002	Maize	cytosol	74.5	74.39
KXG19184	Sorghum	cytosol	74.36	74.25
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	74.79	74.15
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	74.36	74.14
CDX71233	Canola	nucleus	14.61	73.91
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	73.93	73.71
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	73.64	73.43
Os04t0573000-01	Rice	plasma membrane	72.92	73.13
Os02t0678200-01	Rice	plasma membrane	71.63	71.74
OQU82184	Sorghum	cytosol	71.49	71.7
TraesCS6B01G267800.1	Wheat	cytosol	70.92	71.33
TraesCS6D01G238500.1	Wheat	cytosol	70.77	71.18
EES07458	Sorghum	cytosol	70.92	71.12
Zm00001d017597_P001	Maize	cytosol	70.49	71.1
HORVU6Hr1G065710.13	Barley	cytosol	71.06	71.06
TraesCS7D01G058400.1	Wheat	cytosol	72.64	70.81
TraesCS6A01G257300.1	Wheat	cytosol	70.2	70.2
HORVU2Hr1G094690.1	Barley	cytosol	70.34	69.84
TraesCS2B01G417200.1	Wheat	nucleus	69.91	69.71
TraesCS2D01G396700.1	Wheat	nucleus	69.91	69.71
TraesCS2A01G399200.1	Wheat	nucleus	69.63	69.43
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	70.49	68.91
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	73.5	66.97
TraesCS5B01G310500.1	Wheat	cytosol	63.47	63.92
TraesCS5A01G309800.1	Wheat	cytosol	63.47	63.92
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	63.47	63.83
HORVU5Hr1G080250.1	Barley	cytosol	63.47	63.83
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	56.88	62.62
Os09t0521800-00	Rice	cytosol, peroxisome	61.75	62.46
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	52.58	61.47
GSMUA_AchrUn_...	Banana	cytosol	20.92	55.3

Protein Annotations

EntrezGene:100261500	wikigene:100261500	MapMan:24.2.2.2.3	EMBL:AM459636	ProteinID:CAN63492	ProteinID:CAN63492.1
ProteinID:CBI34758	ProteinID:CBI34758.3	UniProt:D7TW83	EMBL:FN596251	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846
EntrezGene:LOC100261500	wikigene:LOC100261500	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105
PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	InterPro:SPX_dom	SUPFAM:SSF103473
TIGR:TC62622	TMHMM:TMhelix	UniParc:UPI00015CD220	ArrayExpress:VIT_02s0025g04540	EnsemblPlantsGene:VIT_02s0025g04540	EnsemblPlants:VIT_02s0025g04540.t01
unigene:Vvi.9585	RefSeq:XP_002282540	RefSeq:XP_002282540.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:4082153..4093292

Molecular Weight (calculated)

77998.9 Da

IEP (calculated)

6.267

GRAVY (calculated)

0.214

Length

698 amino acids

Sequence
(BLAST)

001: MVAFGKKLKE RQIQEWQGYY INYKLMKKKV KQYVQQIEGG AQNRRHVLKD FSRMLDTQIE KIVLFLLEQQ GLLASRIAKL GEQHDALQQQ PDISQISELR
101: EAYRAVGRDL LKLLFFVEIN AIGLRKILKK FDKRFGYRFT DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLGDLQD RQGSYLSIYD QPALPLQDPV
201: IDSIKAAVDR LTHSTNFLHF LAQHALIMQE ELPTAVEEHV DDQRYHFMSL LLNLANTFLY MVNTYIVVPT ADNYSMSLGA AATVCGVVIG AMAVAQVFSS
301: VYFSAWSNKS YYRPLIFSSI VLFVGNTMYA LAYDLDSIVV LLLGRLFCGL GSARAVNRRY ISDCVPLKIR MQASAGFVSA SALGMACGPA LAGLLQINFK
401: IYKITFNEDT LPGWVMAVAW LVYLIWLWIS FKEPVRETQE SNIQQESNAE PVENDALEKG LAQPLLLSSE DKQEDEDGDQ DNDVSEEAPE ESRGPATSIG
501: SAYRLLTPSV KVQLLIYFML KYAMEILLSE SSVVTTYYFN WSTSTVAIFL ACLGLTVLPV NIAVGSYISN MFEDRQILLA SEIMVLIGIL LSFNIIIPYS
601: VPQYVCSGLI MFVSAEVLEG VNLALLSRVM SSRLSRGTYN GGLLSTEAGT IARVIADGTI TLVGYLGESK LLNITLLPSL LICISSIIAT FFTYNSLY

Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.