Factsheet for TraesCS4A01G425300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	98.29	98.29
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	98.0	98.0
TraesCS7D01G058400.1	Wheat	cytosol	96.86	94.69
Zm00001d036020_P002	Maize	cytosol	92.14	92.27
Os06t0129400-02	Rice	plasma membrane	91.86	92.12
KXG19184	Sorghum	cytosol	91.86	91.99
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	91.14	83.29
VIT_02s0025g04540.t01	Wine grape	extracellular	73.43	73.64
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	72.43	72.74
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	71.86	72.37
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	71.71	72.23
PGSC0003DMT400032620	Potato	mitochondrion	70.86	71.47
KRG91596	Soybean	mitochondrion	71.14	71.45
TraesCS2A01G399200.1	Wheat	nucleus	71.29	71.29
Bra027004.1-P	Field mustard	mitochondrion	70.86	71.16
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	71.86	71.05
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	71.0	71.0
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	71.14	70.94
KRH35227	Soybean	plasma membrane	70.57	70.88
TraesCS6A01G257300.1	Wheat	cytosol	70.57	70.77
Bra013668.1-P	Field mustard	mitochondrion	70.0	70.0
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.29	69.58
VIT_15s0048g01090.t01	Wine grape	cytosol	68.43	68.82
AT4G11810.1	Thale cress	plasma membrane	69.43	68.74
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.0	68.09
TraesCS5A01G309800.1	Wheat	cytosol	66.71	67.39
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	50.29	65.19
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	64.14	64.42
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.86	64.13
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.0	63.17
CDY41366	Canola	extracellular, golgi	11.86	52.2
PGSC0003DMT400056104	Potato	cytosol	12.86	52.02
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF19	InterPro:SPX_dom
SUPFAM:SSF103473	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G425300	EnsemblPlants:TraesCS4A01G425300.1	TIGR:cd06174	TIGR:cd14479
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:697382833..697390065

Molecular Weight (calculated)

77549.9 Da

IEP (calculated)

7.368

GRAVY (calculated)

0.173

Length

700 amino acids

Sequence
(BLAST)

001: MVRFGKKLMA DQVPEWRGYY INYKLMKKKV KQYGQQLQQG EKDRRRVLKD FSKMLDDQIE TIVLFLLEQQ GRLASRIEKL GKQRAILVEQ PDISAIAELR
101: EAYREVGLDL IKLLKFVDLN ATGIRKILKK FDKRFSYRFT DYYVSSRSNH PYSQLQQVFK HVGVGAVVGA LSRNLADLQE RQGSYLSIYD QPSSALKDPI
201: IDMINSSVDK LTRSTNFLRF LGQHALIAQE ESPSTAGEEE IEDQKYHFVS LMLNLVNTFL YMVNTYIIVP TADDYSVSLG AASTVCGVVI GSMAVAQVFS
301: SVYFSAWSNK SYFKPLVFSS IVLFLGNVCY AMAYDTKSLT VLIVGRLLCG LGSARAVNRR YISDCVPARI RMQASAGFVS ASALGMACGP ALAGLLQWRF
401: KVYMVTFSQS TLPGWLMAVA WLLYLVWLCI SFKEPNRATE ADDTPHNRAS GQSVDIGQVE NGLAQPLLGD SESKLNDDDD DDEEDESEES AQDSRKPATS
501: IGSAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITSHY FNWNTSSVAI FLAILGLTVL PINAVVGTYI SNMFEDRQLL MASQITLLVG IIFSFKVTST
601: YSVIQYVVSA LITFVSAEVL EGVNLSLLSS VMSSRLSRGT YNGGLLSTEA GTLARVVADC TITAAGYLGI GSLLNVTLLP SLVICAASIA CTFLTYNSLF

Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.