CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93857	Canola	endoplasmic reticulum, extracellular	9.43	15.96
CDY28410	Canola	golgi, nucleus, plasma membrane	45.28	14.63
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	52.2	13.9
GSMUA_Achr1P18870_001	Banana	cytosol	56.6	12.88
CDY41259	Canola	mitochondrion	55.97	12.71
CDX86744	Canola	cytosol, peroxisome, plasma membrane	55.97	12.64
CDY13281	Canola	cytosol, peroxisome, plasma membrane	55.97	12.64
CDY45470	Canola	mitochondrion	54.72	12.54
CDY10843	Canola	mitochondrion	54.72	12.52
GSMUA_Achr11P...	Banana	cytosol	54.72	12.48
Os06t0129400-02	Rice	plasma membrane	54.72	12.46
CDY64893	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	54.72	12.39
CDY66560	Canola	cytosol, mitochondrion, nucleus, peroxisome	54.72	12.39
KXG19184	Sorghum	cytosol	54.09	12.3
Os04t0573000-01	Rice	plasma membrane	53.46	12.21
CDY45970	Canola	mitochondrion	52.83	12.05
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	52.83	12.0
Zm00001d017597_P001	Maize	cytosol	52.2	11.99
EES07458	Sorghum	cytosol	52.2	11.93
Zm00001d036020_P002	Maize	cytosol	52.2	11.87
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	52.2	11.86
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	51.57	11.71
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	51.57	11.65
TraesCS7D01G058400.1	Wheat	cytosol	51.57	11.45
TraesCS2D01G396700.1	Wheat	nucleus	50.31	11.43
Os02t0678200-01	Rice	plasma membrane	49.69	11.33
HORVU6Hr1G065710.13	Barley	cytosol	49.69	11.32
TraesCS2A01G399200.1	Wheat	nucleus	49.69	11.29
OQU82184	Sorghum	cytosol	49.06	11.21
TraesCS2B01G417200.1	Wheat	nucleus	49.06	11.14
HORVU2Hr1G094690.1	Barley	cytosol	49.06	11.1
TraesCS6B01G267800.1	Wheat	cytosol	48.43	11.1
Os09t0521800-00	Rice	cytosol, peroxisome	47.8	11.01
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	52.83	10.97
TraesCS6D01G238500.1	Wheat	cytosol	47.8	10.95
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	49.06	10.92
TraesCS6A01G257300.1	Wheat	cytosol	47.8	10.89
TraesCS5B01G310500.1	Wheat	cytosol	43.4	9.96
HORVU5Hr1G080250.1	Barley	cytosol	43.4	9.94
TraesCS5A01G309800.1	Wheat	cytosol	42.77	9.81
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	42.77	9.8
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	19.5	4.89
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
CDX73315	Canola	mitochondrion	0.0	0.0
CDX71233	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY41366	EnsemblPlantsGene:GSBRNA2T00072932001	Gene3D:1.20.1250.20	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	ProteinID:CDY41366
ProteinID:CDY41366.1	TMHMM:TMhelix	UniParc:UPI0004EEBB7B	UniProt:A0A078HUH4	MapMan:35.1	:

Description

BnaC03g65110DBnaC03g65110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUH4]

Coordinates

chrLK032496:-:39811..40722

Molecular Weight (calculated)

17619.4 Da

IEP (calculated)

4.472

GRAVY (calculated)

0.117

Length

159 amino acids

Sequence
(BLAST)

001: MQASAGFVST SALGIACGPA LAGLLQTSFE IYKLTFNQDT LPGWVMAIAW LICTPGPDAL LEPDRMSVLE ARRSTRANED IDDQVEYEDE SEKASKDSRT
101: PANLLLNRLR TPSLKVQLLI NIMLKYAMEI LLFESIVITI TTLVDQQARL RSSWLVSLS

Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.