Factsheet for GSMUA_Achr1P18870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	76.39	76.61
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	77.11	76.56
VIT_02s0025g04540.t01	Wine grape	extracellular	75.25	75.36
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	74.82	75.25
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	74.68	75.11
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	74.68	74.89
PGSC0003DMT400032620	Potato	mitochondrion	73.1	73.63
KRG91596	Soybean	mitochondrion	73.39	73.6
KRH35227	Soybean	plasma membrane	73.1	73.31
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	72.25	72.14
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.67	70.88
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	71.1	70.8
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.89	70.43
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	60.09	70.35
Bra013668.1-P	Field mustard	mitochondrion	70.39	70.29
Bra027004.1-P	Field mustard	mitochondrion	69.81	70.01
VIT_15s0048g01090.t01	Wine grape	cytosol	69.67	69.97
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	70.67	69.77
AT4G11810.1	Thale cress	plasma membrane	70.1	69.31
TraesCS5B01G310500.1	Wheat	cytosol	67.38	67.97
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	67.24	67.72
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	52.22	67.59
HORVU5Hr1G080250.1	Barley	cytosol	67.1	67.58
TraesCS5A01G309800.1	Wheat	cytosol	66.52	67.1
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	66.52	66.71
GSMUA_AchrUn_...	Banana	cytosol	25.04	66.29
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	65.67	65.85
Os09t0521800-00	Rice	cytosol, peroxisome	64.09	64.93
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.09	64.2
CDY41366	Canola	extracellular, golgi	12.88	56.6
PGSC0003DMT400056104	Potato	cytosol	12.3	49.71
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr1G18870_001	EnsemblPlants:GSMUA_Achr1P18870_001	EnsemblPlants:GSMUA_Achr1T18870_001	InterPro:IPR004331	InterPro:IPR020846
UniProt:M0S145	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105	PFAM:PF07690
PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF19	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000296CC9A	SEG:seg	:	:	:	:

Description

SPX domain-containing membrane protein Os04g0573000 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18870_001]

Coordinates

chr1:+:14103768..14116565

Molecular Weight (calculated)

77967.2 Da

IEP (calculated)

6.157

GRAVY (calculated)

0.165

Length

699 amino acids

Sequence
(BLAST)

001: MVNFGKKLTA NRVQEWERYY INYKLMKKKV KQFAQQIQEG GQDRRRVLKE FSRMLDDQIE KTVLFFLEQQ GIIAHRIQEL GDQRTILLEQ PDISKISELR
101: EAYSAVGQDL LKLLRFVDLN ATGIRKILKK FDKRFGYKFT DYYLSTRSNH PYSQLQQVFK HVGVAAVVGA LSRNLADLQE RQGSYLSIYD QPSTALTVQD
201: PVIYLIHASV DKLTRSTNFL QYLGQHALIV HEDVPSAEED QVDDKRYHFM SLLLNLANTF LYMVNTYIIV PTADDYSMSL GAAATVCGII IGSMAVAQVF
301: SSVYFSAWSN RSYFKPLVFS SIVLFLGNTL YALAYDLDSL PILLIGRLLC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQTN
401: FKIYALTINQ DTLPGWVMAF AWLAYLIWLW ISFKEPIRDT EVKHSSPDVD AGHDENESLE SGLMQHLLPS SEQKQNEDGD DECNDSEDAS EDSHRPATSV
501: ASAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITSYYF GWSTSSVAIF LAILGLTVLP VNAVIGTYIS NMFEDRQLLL VSEILVLLGI VLSFQFTSSY
601: TVPQYVCSAL ITFVAAEVLE GVNLSLLSQV MSSRLARGTY NGGLLSTEAG TLARVVADGT ITLAGYLGES KLLNITLFPS LLICVASIAA TIRNYNSLF

Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.