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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400010867 Potato extracellular, plasma membrane, vacuole 42.2 28.4
PGSC0003DMT400000009 Potato cytosol, peroxisome, plastid 75.14 24.07
Solyc01g091870.2.1 Tomato cytosol 79.19 19.63
VIT_15s0048g01090.t01 Wine grape cytosol 56.65 14.08
CDY28410 Canola golgi, nucleus, plasma membrane 39.88 14.02
GSMUA_Achr11P... Banana cytosol 54.91 13.63
KRH00680 Soybean cytosol, mitochondrion, nucleus, plasma membrane 54.91 13.63
TraesCS6D01G238500.1 Wheat cytosol 52.6 13.11
TraesCS6B01G267800.1 Wheat cytosol 52.6 13.11
PGSC0003DMT400032620 Potato mitochondrion 52.6 13.11
KRH40511 Soybean cytosol, mitochondrion, nucleus, plasma membrane 52.6 13.06
PGSC0003DMT400058570 Potato cytosol, peroxisome, plasma membrane 52.6 13.06
TraesCS4A01G425300.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 52.02 12.86
HORVU6Hr1G065710.13 Barley cytosol 51.45 12.75
TraesCS6A01G257300.1 Wheat cytosol 51.45 12.75
KXG19184 Sorghum cytosol 51.45 12.73
Zm00001d036020_P002 Maize cytosol 51.45 12.73
GSMUA_Achr5P10440_001 Banana cytosol, nucleus, plasma membrane 51.45 12.64
Zm00001d017597_P001 Maize cytosol 50.29 12.57
TraesCS7D01G058400.1 Wheat cytosol 52.02 12.57
GSMUA_AchrUn_... Banana mitochondrion, plasma membrane 43.35 12.56
HORVU2Hr1G094690.1 Barley cytosol 50.87 12.52
OQU82184 Sorghum cytosol 50.29 12.5
EES07458 Sorghum cytosol 50.29 12.5
Os02t0678200-01 Rice plasma membrane 50.29 12.48
Os06t0129400-02 Rice plasma membrane 50.29 12.46
TraesCS7A01G063700.3 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 50.29 12.43
HORVU7Hr1G011890.1 Barley cytosol, mitochondrion, peroxisome, plasma membrane 50.29 12.43
Os04t0573000-01 Rice plasma membrane 49.71 12.36
GSMUA_Achr1P18870_001 Banana cytosol 49.71 12.3
TraesCS2D01G396700.1 Wheat nucleus 49.71 12.29
TraesCS2B01G417200.1 Wheat nucleus 49.71 12.29
TraesCS2A01G399200.1 Wheat nucleus 49.71 12.29
Zm00001d002614_P004 Maize cytosol, peroxisome, plasma membrane 49.71 12.04
Bra034426.1-P Field mustard cytosol, nucleus, plasma membrane 46.24 11.83
Zm00001d045491_P003 Maize cytosol, nucleus, plasma membrane 50.87 11.49
Os09t0521800-00 Rice cytosol, peroxisome 41.62 10.43
TraesCS5B01G310500.1 Wheat cytosol 40.46 10.1
TraesCS5D01G316800.1 Wheat cytosol, peroxisome, plasma membrane 40.46 10.09
HORVU5Hr1G080250.1 Barley cytosol 40.46 10.09
TraesCS5A01G309800.1 Wheat cytosol 39.88 9.96
Zm00001d026070_P002 Maize cytosol, peroxisome, plasma membrane 32.95 8.99
GSMUA_AchrUn_... Banana cytosol 4.62 3.03
CDX73315 Canola mitochondrion 0.58 0.77
Protein Annotations
EnsemblPlants:PGSC0003DMT400056104EnsemblPlantsGene:PGSC0003DMG400021793GO:GO:0005575GO:GO:0016020GO:GO:0016021PANTHER:PTHR23510
PANTHER:PTHR23510:SF55PGSC:PGSC0003DMG400021793SEG:segTMHMM:TMhelixUniParc:UPI0002968979UniProt:M1BYY4
MapMan:24.2.2.2.3:::::
Description
SPX domain-containing membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021793]
Coordinates
chr3:-:32666138..32667761
Molecular Weight (calculated)
19732.9 Da
IEP (calculated)
4.599
GRAVY (calculated)
-0.031
Length
173 amino acids
Sequence
(BLAST)
001: MKKKVKNYPQ QIEVSEQSHE MDNGSCMVCY RLCLWTTFRE PPMLEIEDVP LPKSNSWKIE NGLVQKGITQ PLLLSAEETK PDEDDDQDCD NSEKSAEEIH
101: KHVTSIVSVY KFLTPSVKVQ LLIYFMLKYA MEILLAESSV FITYYFIWST SNVAIFLACL GLTVLPVNIL VGS
Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)
001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY
Arabidopsis Description
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.