Factsheet for PGSC0003DMT400000009

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056104	Potato	cytosol	24.07	75.14
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	35.19	73.93
Solyc01g091870.2.1	Tomato	cytosol	95.56	73.93
CDY28410	Canola	golgi, nucleus, plasma membrane	62.41	68.5
VIT_15s0048g01090.t01	Wine grape	cytosol	75.0	58.19
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	70.74	54.81
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	60.56	54.77
PGSC0003DMT400032620	Potato	mitochondrion	70.37	54.76
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	70.37	54.52
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	69.81	54.09
GSMUA_Achr11P...	Banana	cytosol	69.07	53.52
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	65.56	52.37
GSMUA_Achr1P18870_001	Banana	cytosol	67.59	52.22
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	67.96	52.13
Os02t0678200-01	Rice	plasma membrane	65.93	51.08
HORVU6Hr1G065710.13	Barley	cytosol	65.74	50.86
TraesCS6B01G267800.1	Wheat	cytosol	65.0	50.58
TraesCS6D01G238500.1	Wheat	cytosol	65.0	50.58
TraesCS6A01G257300.1	Wheat	cytosol	65.19	50.43
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	65.19	50.29
Zm00001d017597_P001	Maize	cytosol	64.26	50.14
Os04t0573000-01	Rice	plasma membrane	64.63	50.14
OQU82184	Sorghum	cytosol	64.63	50.14
KXG19184	Sorghum	cytosol	64.81	50.07
Zm00001d036020_P002	Maize	cytosol	64.81	50.07
EES07458	Sorghum	cytosol	64.44	50.0
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	64.63	49.86
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	64.63	49.86
TraesCS2D01G396700.1	Wheat	nucleus	64.26	49.57
Os06t0129400-02	Rice	plasma membrane	64.07	49.57
TraesCS2B01G417200.1	Wheat	nucleus	64.07	49.43
TraesCS2A01G399200.1	Wheat	nucleus	64.07	49.43
HORVU2Hr1G094690.1	Barley	cytosol	63.89	49.08
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	64.07	48.46
TraesCS7D01G058400.1	Wheat	cytosol	63.89	48.18
Os09t0521800-00	Rice	cytosol, peroxisome	59.07	46.23
TraesCS5A01G309800.1	Wheat	cytosol	59.26	46.18
TraesCS5B01G310500.1	Wheat	cytosol	59.07	46.03
HORVU5Hr1G080250.1	Barley	cytosol	58.89	45.82
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	58.89	45.82
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	63.7	44.91
CDX73315	Canola	mitochondrion	10.37	43.08
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	50.56	43.06
GSMUA_AchrUn_...	Banana	cytosol	5.56	11.36

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR020846	UniProt:M0ZFY3	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF07690	EnsemblPlantsGene:PGSC0003DMG400000003	PGSC:PGSC0003DMG400000003	EnsemblPlants:PGSC0003DMT400000009	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000296327D	SEG:seg	:	:

Description

SPX domain-containing membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000003]

Coordinates

chr1:+:71293234..71298560

Molecular Weight (calculated)

59373.2 Da

IEP (calculated)

4.576

GRAVY (calculated)

0.436

Length

540 amino acids

Sequence
(BLAST)

001: MQGVSAVVGT ISRNLADLQD NKGNYTSIYD HPDLPLQDPI IGSINQAVDR LTNSTDFLHY LGKHALILPE ELPTPSEDHA ANERYHLMSL LLNLANAFLY
101: MVNTYIIVPT ADDYSMSLGA AATLCGAVIG SMAVAQVFSS VYFSAWSNKS YMKPLLFSSI VLLVGNTLYA LAYDFNSIYF LLAGRLFCGL GSARAVNRRY
201: ITDCVPLHLR MKASAGFVSA SALGMACGPA VACLLQTNFK FLNITFNQDT LPGWIMALAW FIYLLCVWTT FREPPMEEIE DVLLPKSNSV SGKIENGLMQ
301: KGITQPLLLS EEETKQDEDE DQDCDNSEES AEEIQKPVTS IVSAYKLLTP SVKVQLLIYF MLKYAMEILL AESSVVTTYY FIWSTSNVAV FLACLGLTVL
401: PVNILVGSYL SNIFEERQVL LASEILVCLG IVLSFHVVIP YSVPQYVCSA LITFVAAEVL EGVNLNLLSR VMSSRLSKGT YNGGLLSTEA GTLARVFADS
501: TITLAGYWGM SRLLNVTLLP SLFICIFSII ATCFTYNSMY

Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.