Factsheet for GSMUA_AchrUn_randomP05490_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P18870_001	Banana	cytosol	66.29	25.04
GSMUA_Achr11P...	Banana	cytosol	60.23	22.81
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	57.2	21.45
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	55.3	21.01
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	55.3	21.01
VIT_02s0025g04540.t01	Wine grape	extracellular	55.3	20.92
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	54.55	20.66
KRH35227	Soybean	plasma membrane	54.55	20.66
KRG91596	Soybean	mitochondrion	54.55	20.66
PGSC0003DMT400032620	Potato	mitochondrion	53.79	20.46
VIT_15s0048g01090.t01	Wine grape	cytosol	52.27	19.83
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.14	19.37
Bra013668.1-P	Field mustard	mitochondrion	50.38	19.0
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	50.38	19.0
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	50.0	18.94
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	50.0	18.94
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	50.76	18.93
AT4G11810.1	Thale cress	plasma membrane	50.38	18.81
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	50.0	18.8
Bra027004.1-P	Field mustard	mitochondrion	49.62	18.79
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.08	17.6
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	11.36	5.56
PGSC0003DMT400056104	Potato	cytosol	3.03	4.62
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	7.58	3.35
CDY41366	Canola	extracellular, golgi	0.0	0.0
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	0.0	0.0
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP05490_001	EnsemblPlants:GSMUA_AchrUn_randomT05490_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG05490_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR004331	InterPro:SPX_dom	PANTHER:PTHR23510	PANTHER:PTHR23510:SF19	PFAM:PF03105	PFscan:PS51382
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002957055	UniProt:M0U6L1	MapMan:24.2.2.2.3	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05490_001]

Coordinates

chrchrUn_random:+:21686765..21689533

Molecular Weight (calculated)

31353.1 Da

IEP (calculated)

8.679

GRAVY (calculated)

-0.143

Length

264 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA NQVQEWERYY INYNLMKKMV EQFVQQMQQG RKDRHHVLKE FSKMLDDQIE KTVLFFLEQQ GILACRIQEL DEQQTKLLEH PDISEISELR
101: EAYAAAGHDL LRLLRFLDLN ATGIRKILKK FDKCFGYKFT DYYLSTRSNH PYSQLQQVFK HVGIAAVVGA LSRKLADLQE HQGSYLSIYD QPSTTLTKIL
201: FFFSISFSFF YFNLFMGLLV PCIQFHHLIH YLLLYISYEY AIWWQDMQFR IIPFVPGGTY RSVS

Best Arabidopsis Sequence Match ( AT4G11810.3 )
(BLAST)

001: MVAFGKKLKE RSIEEWQEYY INYKLMKKKV KQYGPQIEVG SLDRRHVLKD FSRMLDHQIE KIALFMLEQQ GLLSSRLQKL REWHDTLQDE PDLSQIAKLR
101: EAYRAVGQDL LKLLFFIDMN AIGIRKILKK FDKRFGYRFT NYYVKTRADH PYSQLQQVFR HVGLGAVVGA ISRNLHELQN NEGSYLSIYD QPVLPLQDPV
201: VDSIKNAVDR LTHSTNFLNF MAQHALIMQD DEDLLMLPPD EQAEKEEGRY HFMSLLLNLA NTFLYMVNTY IIVPTADDYS MSLGAAATVC GVVIGAMAVA
301: QLFSSVYFSA WSNKSYFKPL IFSSIVLFFG NLLYALAYDF NSLALLLIGR LFCGFGSARA VNRRYISDCV PLKIRMQASA GFVSASALGM ACGPALAGLL
401: QTDFKIKNVT FNQDTLPGWV MAVAWLLYLV WLAISFREPA REPEEIHTSQ ESTSADQDGN IEKGLKKPLL LASEETEHDE EDDGDGSEES SDDSRKPANS
501: FVAAYKLLTP SVKVQLLIYF MLKYAMEILL SESSVVTTYY FGWSMSSVSI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LASEIMVCIG IVLSFHVVIP
601: YTVPQYVISG FIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITLAGFLGQ SMLLNVTLLP SLIICVLSIL ATCYTYNSLY

Arabidopsis Description

SPX domain-containing membrane protein At4g11810 [Source:UniProtKB/Swiss-Prot;Acc:Q9T050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.