CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
vacuole 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	92.54	92.54
VIT_15s0048g01090.t01	Wine grape	cytosol	74.32	74.43
CDX73315	Canola	mitochondrion	13.34	71.54
CDY28410	Canola	golgi, nucleus, plasma membrane	50.07	70.94
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	54.81	70.74
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	69.15	69.35
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	68.87	69.06
KRH35227	Soybean	plasma membrane	68.87	68.87
KRG91596	Soybean	mitochondrion	68.58	68.58
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	66.14	68.2
GSMUA_Achr11P...	Banana	cytosol	67.29	67.29
GSMUA_Achr1P18870_001	Banana	cytosol	65.85	65.67
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	66.0	65.34
Os06t0129400-02	Rice	plasma membrane	65.42	65.33
Os04t0573000-01	Rice	plasma membrane	65.14	65.23
Zm00001d036020_P002	Maize	cytosol	64.99	64.81
Os02t0678200-01	Rice	plasma membrane	64.42	64.42
KXG19184	Sorghum	cytosol	64.28	64.09
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	64.13	63.86
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	64.13	63.86
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	63.99	63.71
TraesCS6D01G238500.1	Wheat	cytosol	63.41	63.69
TraesCS6B01G267800.1	Wheat	cytosol	63.13	63.4
OQU82184	Sorghum	cytosol	63.13	63.22
HORVU6Hr1G065710.13	Barley	cytosol	63.27	63.18
Zm00001d017597_P001	Maize	cytosol	62.7	63.15
EES07458	Sorghum	cytosol	62.98	63.07
TraesCS6A01G257300.1	Wheat	cytosol	62.98	62.89
TraesCS2A01G399200.1	Wheat	nucleus	62.84	62.57
HORVU2Hr1G094690.1	Barley	cytosol	62.84	62.3
TraesCS2B01G417200.1	Wheat	nucleus	62.55	62.29
TraesCS2D01G396700.1	Wheat	nucleus	62.55	62.29
TraesCS7D01G058400.1	Wheat	cytosol	63.41	61.73
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	62.27	60.78
Os09t0521800-00	Rice	cytosol, peroxisome	57.82	58.41
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	63.99	58.22
HORVU5Hr1G080250.1	Barley	cytosol	57.96	58.21
TraesCS5B01G310500.1	Wheat	cytosol	57.53	57.86
TraesCS5A01G309800.1	Wheat	cytosol	57.25	57.58
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	57.25	57.49
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	51.36	56.47
PGSC0003DMT400056104	Potato	cytosol	13.63	54.91
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	46.05	53.77
GSMUA_AchrUn_...	Banana	cytosol	18.94	50.0
Solyc10g050320.1.1	Tomato	cytosol	4.59	33.33
Solyc04g026050.1.1	Tomato	extracellular	5.45	27.14
Solyc08g044470.1.1	Tomato	cytosol	4.88	25.0
Solyc12g082710.1.1	Tomato	cytosol	4.73	14.29
Solyc10g050310.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	0.72	2.76

Protein Annotations

EntrezGene:100793709	MapMan:24.2.2.2.3	EMBL:ACUP02011467	EnsemblPlantsGene:GLYMA_18G228700	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846
UniProt:K7MU69	EnsemblPlants:KRH00680	ProteinID:KRH00680	ProteinID:KRH00680.1	ProteinID:KRH00681.1	ProteinID:KRH00682.1
InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105	PFAM:PF07690	PFscan:PS51382
PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000296645E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:51774933..51789151

Molecular Weight (calculated)

78672.1 Da

IEP (calculated)

7.005

GRAVY (calculated)

0.232

Length

697 amino acids

Sequence
(BLAST)

001: MVGYCKKLRE LQIQEWKGYY INYKLMKKKV KRYVEQMEVG AQNRHNVLRD FSMLLDNQIE KIVLFLLEQQ GVLAHRLSNI GQDHHTLFQQ SNSINISELQ
101: EAYRDVGRDL LRLLNFVEMN AIGLRKILKK FDKRFGYKFT DYYVKTRANH PYSQLRQVFR HVGIGAVVGV LSHGLADLQD LQQSLGSYIS IYDQPSYTHQ
201: DPILDSIKEA VARLSNSTNF LQFLGRHAFI MKEELPFPSE DHIVDERYHF MSLLLNLANT FLYMVNTYII VPTADNYTLS LGAAASVCGV VIGMMAVAQV
301: FSSVYFSAWS NRSYLRPLIF SSIVLVVGNT LYALAFDMNS IVVLLMGRLF CGLGSARAVN RRYISDCVPL KLRMQASAGF VSASALGMAC GPALACLLQT
401: NFRIYRFTMN QDTLPGWIMA LAWLVYLLWL WICFKEPAHE NQGNLVLYHA DTEPVVQVAV GNERTQPLLM NSEEKELDED GEEENDNTEE TKKPVTSIVV
501: AYKLLTPSVK VQLFVYFMLK YAMEIILAES SLITEYYFIW TTSNVSIFLA CLGLTVLPVN IVVGNYISNM FEERQVLLTS EIMVCIGLLL SFHIMIPYSV
601: TQYVGSALIT FVSAEVLEGV NLSLLSKMMS SRLSRGTFNG GLLSTEAGTL ARVIADGTIT ISGYFSESKL LNTTLLPALL ICISSIIATC YSYNSLY

Best Arabidopsis Sequence Match ( AT4G11810.2 )
(BLAST)

001: MVAFGKKLKE RSIEEWQEYY INYKLMKKKV KQYGPQIEVG SLDRRHVLKD FSRMLDHQIE KIALFMLEQQ GLLSSRLQKL REWHDTLQDE PDLSQIAKLR
101: EAYRAVGQDL LKLLFFIDMN AIGIRKILKK FDKRFGYRFT NYYVKTRADH PYSQLQQVFR HVGLGAVVGA ISRNLHELQN NEGSYLSIYD QPVLPLQDPV
201: VDSIKNAVDR LTHSTNFLNF MAQHALIMQD DEDLLMLPPD EQAEKEEGRY HFMSLLLNLA NTFLYMVNTY IIVPTADDYS MSLGAAATVC GVVIGAMAVA
301: QLFSSVYFSA WSNKSYFKPL IFSSIVLFFG NLLYALAYDF NSLALLLIGR LFCGFGSARA VNRRYISDCV PLKIRMQASA GFVSASALGM ACGPALAGLL
401: QTDFKIKNVT FNQDTLPGWV MAVAWLLYLV WLAISFREPA REPEEIHTSQ ESTSADQDGN IEKGLKKPLL LASEETEHDE EDDGDGSEES SDDSRKPANS
501: FVAAYKLLTP SVKVQLLIYF MLKYAMEILL SESSVVTTYY FGWSMSSVSI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LASEIMVCIG IVLSFHVVIP
601: YTVPQYVISG FIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITLAGFLGQ SMLLNVTLLP SLIICVLSIL ATCYTYNSLY

Arabidopsis Description

SPX domain-containing membrane protein At4g11810 [Source:UniProtKB/Swiss-Prot;Acc:Q9T050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.