CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	94.54	92.16
Os04t0573000-01	Rice	plasma membrane	87.36	87.36
TraesCS2D01G396700.1	Wheat	nucleus	84.34	83.86
HORVU2Hr1G094690.1	Barley	cytosol	84.48	83.64
TraesCS2B01G417200.1	Wheat	nucleus	83.91	83.43
TraesCS2A01G399200.1	Wheat	nucleus	83.76	83.29
EES07458	Sorghum	cytosol	76.87	76.87
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	75.72	74.86
GSMUA_Achr11P...	Banana	cytosol	74.57	74.46
KXG19184	Sorghum	cytosol	73.56	73.25
VIT_02s0025g04540.t01	Wine grape	extracellular	71.7	71.49
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	70.98	71.08
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	70.98	71.08
KRG91596	Soybean	mitochondrion	70.26	70.16
PGSC0003DMT400032620	Potato	mitochondrion	69.68	69.88
KRH35227	Soybean	plasma membrane	69.68	69.58
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	69.11	69.01
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.29	68.48
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	68.68	68.09
Bra013668.1-P	Field mustard	mitochondrion	68.39	68.0
Bra027004.1-P	Field mustard	mitochondrion	67.96	67.86
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	68.97	67.8
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	67.82	67.43
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.1	67.0
AT4G11810.1	Thale cress	plasma membrane	67.82	66.76
VIT_15s0048g01090.t01	Wine grape	cytosol	66.52	66.52
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	50.14	64.63
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.94	63.85
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.64	63.46
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.22	63.13
PGSC0003DMT400056104	Potato	cytosol	12.5	50.29
CDY41366	Canola	extracellular, golgi	11.21	49.06
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	EntrezGene:8057610	UniProt:C5YE54	ProteinID:EES11292.1	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846
ProteinID:KXG26954.1	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	EnsemblPlants:OQU82184	ProteinID:OQU82184
ProteinID:OQU82184.1	ProteinID:OQU82185.1	PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510
PANTHER:PTHR23510:SF23	EnsemblPlantsGene:SORBI_3006G185500	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0001A86D55
RefSeq:XP_002446964.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:54061370..54070827

Molecular Weight (calculated)

77973.8 Da

IEP (calculated)

6.109

GRAVY (calculated)

0.268

Length

696 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA DQVEEWKGYY INYKLMKKML KQYVQQTQHG GKDREQVLKD FSRILDDQIE RIVLFLLQQQ GHLASRIEEL GEKRIVLLEE YDISQVYQLH
101: DAYREVGLDL IKLLRFVDVN ATGIRKILKK FDKRFGYKFT DYYVTTRANH PYSQLQQVFK QVGIVAVVGA LSRNLEYLQH HEGSFVSIYD RPAVTLKDPI
201: IDQVNNAVQK LTHATNFMQF LGQHSLIVQE DAQSGSEDLV DDQSYHFMSL MLNLVNTFLY MVNTYIIVPT ADDYAVSLGA AATVCGVIIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI MLFLGNLLYA LAYDLNSLIV LLIGRLLCGL GSARAVNRRY ISDCVPLKMR LQASAGFVSA SALGMACGPA LAGFLQIKFK
401: IYSLTFNQST LPGWVMCIAW FIYLLWLWLT FKEPEHFTKT LVSEQPSESG CQGNSNLEEG LAQPLLVGIE QRQEENSEDN DDTELASESS HEPATSIASA
501: YRLLTPSVKA QLLIYFMLKY AMEILLSESS VVTTYYFSWT TSVVAIFLAI LGLTVLPVNA IVGSYITNLF EDRQILLASE VMVLIGIIMS FRFTPHYSIP
601: QYVISALITF VFAEVLEGVN LSLLSRVMSS RLSRGTYNGG LLSTEAGTLA RVVADATITA AGYLGTDLLL NITLVPSLVI CIVSIAATLY TYNNLY

Best Arabidopsis Sequence Match ( AT4G22990.2 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSEAVQDVN LEKGMKQPLL LTSEEIEEQG EDECDGSEEA SEDSRTPANS
501: ILAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITTYY FGWSTSSVAI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LVSEIMVCVG ILLSFHVVVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITVAGFFGR NMLLNVTLLP SLVICVLSIV ATCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.