Factsheet for PGSC0003DMT400058570

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g080200.2.1	Tomato	unclear	95.41	98.96
PGSC0003DMT400032620	Potato	mitochondrion	84.07	84.44
VIT_02s0025g04540.t01	Wine grape	extracellular	83.79	83.67
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	30.42	82.49
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	81.06	81.3
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	80.77	81.01
KRG91596	Soybean	mitochondrion	79.91	79.91
KRH35227	Soybean	plasma membrane	79.48	79.48
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	79.48	79.14
CDY10843	Canola	mitochondrion	77.91	78.13
CDY41259	Canola	mitochondrion	78.19	77.86
Bra013668.1-P	Field mustard	mitochondrion	78.05	77.71
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	77.33	77.33
CDY13281	Canola	cytosol, peroxisome, plasma membrane	77.62	76.85
CDX86744	Canola	cytosol, peroxisome, plasma membrane	77.33	76.56
AT4G11810.1	Thale cress	plasma membrane	77.33	76.24
GSMUA_Achr1P18870_001	Banana	cytosol	74.89	74.68
GSMUA_Achr11P...	Banana	cytosol	74.17	74.17
Zm00001d036020_P002	Maize	cytosol	73.89	73.68
Os06t0129400-02	Rice	plasma membrane	73.46	73.35
KXG19184	Sorghum	cytosol	73.31	73.1
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	72.74	72.43
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	72.74	72.43
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	72.74	72.43
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	72.88	72.16
Os04t0573000-01	Rice	plasma membrane	70.73	70.83
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	54.52	70.37
TraesCS7D01G058400.1	Wheat	cytosol	71.74	69.83
TraesCS6B01G267800.1	Wheat	cytosol	69.15	69.45
TraesCS6D01G238500.1	Wheat	cytosol	69.01	69.31
Os02t0678200-01	Rice	plasma membrane	69.3	69.3
Zm00001d017597_P001	Maize	cytosol	68.72	69.22
OQU82184	Sorghum	cytosol	69.01	69.11
EES07458	Sorghum	cytosol	68.87	68.97
HORVU6Hr1G065710.13	Barley	cytosol	69.01	68.91
TraesCS2D01G396700.1	Wheat	nucleus	68.72	68.43
TraesCS2B01G417200.1	Wheat	nucleus	68.72	68.43
TraesCS2A01G399200.1	Wheat	nucleus	68.72	68.43
TraesCS6A01G257300.1	Wheat	cytosol	68.44	68.34
HORVU2Hr1G094690.1	Barley	cytosol	68.58	67.99
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	68.44	66.81
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	73.03	66.45
TraesCS5A01G309800.1	Wheat	cytosol	64.56	64.94
TraesCS5B01G310500.1	Wheat	cytosol	64.42	64.79
HORVU5Hr1G080250.1	Barley	cytosol	64.28	64.55
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	63.85	64.12
Os09t0521800-00	Rice	cytosol, peroxisome	61.12	61.74
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	55.95	61.51
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	52.08	60.8
GSMUA_AchrUn_...	Banana	cytosol	20.66	54.55
PGSC0003DMT400056104	Potato	cytosol	13.06	52.6

Protein Annotations

EntrezGene:102602880	MapMan:24.2.2.2.3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR004331
InterPro:IPR020846	UniProt:M1C2W4	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105
PFAM:PF07690	EnsemblPlantsGene:PGSC0003DMG402022752	PGSC:PGSC0003DMG402022752	EnsemblPlants:PGSC0003DMT400058570	PFscan:PS51382	PANTHER:PTHR23510
PANTHER:PTHR23510:SF55	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00029560C9	RefSeq:XP_006358856.1
RefSeq:XP_015169635.1	SEG:seg	:	:	:	:

Description

SPX domain-containing membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG402022752]

Coordinates

chr8:-:53883630..53891903

Molecular Weight (calculated)

78423.2 Da

IEP (calculated)

5.777

GRAVY (calculated)

0.161

Length

697 amino acids

Sequence
(BLAST)

001: MVAFGKKLKD RQIQEWQGYY INYKLMKKKV KQYDNQIKAG SLDRRHVLKD FSRMLDNQIE RIVLFMLEQQ GVLASRISEL NKQQESLQEQ PDISKIIELR
101: ESYRDVGRDL LKLLFFVEIN AIGLRKILKK FDKRFGYRFT DYYVKTRANH PYSQLQQVFK HVGLGAVVGA ISRNLADLQD RQGSYLSIYD QPSLPLQDSV
201: VDSLQAAVDR LSHSTNFLNF LAQHALIMQE EFPTPVEEQV DDQRYHFMSL ILNLANTFLY MVNTYIIVPT ADDYSMSLGA AATVCGIVIG AMAVAQIFSS
301: VYFSAWSNRS YFRPLVFSSI VLFVGNIMYA LAYDLKSIPV LLIGRIFCGL GSARAVNRRY ISDCVPLKIR MQASAGFVSA SALGMACGPA LAGLLQTNFK
401: IYKLTFNQDT LPGWLMAFAW LVYLIWLWIS FREPATETEV NTGPQEPANN VENDVLENGV TQPLLLKVED NQQDDENDQE YDESEEAPEE SRQPANSIAE
501: AYRLLTPSVK VQLLIYFMLK YAMEVLLSES SVVTTYYFSW STGTVAIFLA CLGLTVLPIN VVVGSYISNM FEDRQILLVS EIMVFLGILG SFHIVSPYTV
601: PQYVCSGLIM FVAAEVLEGV NLSLLSRVMS SRLSRGTYNG GLLSTEAGTF ARVIADVTIT LAGYLGQSKL LNVTLLPSLL ICLASIIATC YTYNSLY

Best Arabidopsis Sequence Match ( AT4G22990.2 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSEAVQDVN LEKGMKQPLL LTSEEIEEQG EDECDGSEEA SEDSRTPANS
501: ILAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITTYY FGWSTSSVAI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LVSEIMVCVG ILLSFHVVVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITVAGFFGR NMLLNVTLLP SLVICVLSIV ATCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.