Factsheet for HORVU6Hr1G065710.13

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G267800.1	Wheat	cytosol	94.7	95.25
TraesCS6D01G238500.1	Wheat	cytosol	94.56	95.1
TraesCS6A01G257300.1	Wheat	cytosol	93.7	93.7
Os02t0678200-01	Rice	plasma membrane	85.1	85.22
Zm00001d017597_P001	Maize	cytosol	82.23	82.95
EES07458	Sorghum	cytosol	82.23	82.47
HORVU2Hr1G094690.1	Barley	cytosol	77.65	77.1
GSMUA_Achr11P...	Banana	cytosol	73.78	73.89
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	73.35	72.73
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	71.49	71.29
VIT_02s0025g04540.t01	Wine grape	extracellular	71.06	71.06
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	70.34	70.65
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	69.63	69.93
KRG91596	Soybean	mitochondrion	69.77	69.87
KRH35227	Soybean	plasma membrane	69.48	69.58
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	68.91	69.01
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.21	68.48
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.77	67.86
PGSC0003DMT400032620	Potato	mitochondrion	67.34	67.72
Bra013668.1-P	Field mustard	mitochondrion	67.48	67.29
VIT_15s0048g01090.t01	Wine grape	cytosol	66.91	67.1
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	67.48	67.09
Bra027004.1-P	Field mustard	mitochondrion	66.91	67.0
AT4G11810.1	Thale cress	plasma membrane	67.77	66.9
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	66.91	66.71
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	67.19	66.24
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	50.86	65.74
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.75	64.79
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.47	63.56
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.18	63.27
HORVU5Hr1G080250.1	Barley	cytosol	62.18	62.54
PGSC0003DMT400056104	Potato	cytosol	12.75	51.45
CDY41366	Canola	extracellular, golgi	11.32	49.69
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	UniProt:A0A287UGS3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU6Hr1G065710	EnsemblPlants:HORVU6Hr1G065710.13	InterPro:IPR004331	InterPro:IPR020846
InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105	PFAM:PF07690	PFscan:PS51382
PANTHER:PTHR23510	PANTHER:PTHR23510:SF23	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000B47513D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:452629033..452633975

Molecular Weight (calculated)

77504.8 Da

IEP (calculated)

7.994

GRAVY (calculated)

0.197

Length

698 amino acids

Sequence
(BLAST)

001: MVNFGKVLVS DQLEEWKEYY INYKMMKKKV KQYVQQTQSG GRNHEQVLKE FSRMLDEQIE KVVLFLLKQQ GHLASRIEKL GQQRAILTEH CDISQVSQVR
101: EAYRQVGLDL VKLLRFVDMN ATGIRKILKK FDKRFGYRFT DYYVSTRANH PYSQLQPIFK QVGIVAVAGA LTRNLASLQD HQGSFISIYD HPSITLKDPV
201: IEQINNSVQK LTNSTTFLKF LGQHALIVPE DVQTSSEDLV DDQSYHFMSL MLNLVNTFLY MVNTYIIVPT ADDYSVSLGA AATVCGVIIG SMAVAQVFSS
301: VYFSAWSNKS YFRPLVFSSI MLFSGNLLYA LAYDLNSLTV LIVGRLLCGL GSARAVNRRY ISDCVPLKIR LKASAGFVSA SALGMACGPA LAGLLQTEFK
401: IYEVTFNQNT LPGWIMCFAW VANLVWLWIS FKEPDHFAQE NALSTQSSES GHGRSDNLES GLAQPLLTEA KERRNENAED NGDNEEGRKE SHKPATSIAA
501: AYRLLTPSVK VVQLLIYFML KFAMEILLSE SSVVTTFYFN WSTSTVAIFL AVLGLTVLPV NVIVGSYITN LFQDRQILVA SEIMVLIGIA SSFHFSSSYC
601: VAQYVVSALI TFVFAEVLEG VNLSLLSRVM SSRLSRGTYN GGLLSTEAGT LARVAADMTI TAAGYLGQSQ LLNATLLPSL VICVASIAAT FGTYNTLY

Best Arabidopsis Sequence Match ( AT4G11810.3 )
(BLAST)

001: MVAFGKKLKE RSIEEWQEYY INYKLMKKKV KQYGPQIEVG SLDRRHVLKD FSRMLDHQIE KIALFMLEQQ GLLSSRLQKL REWHDTLQDE PDLSQIAKLR
101: EAYRAVGQDL LKLLFFIDMN AIGIRKILKK FDKRFGYRFT NYYVKTRADH PYSQLQQVFR HVGLGAVVGA ISRNLHELQN NEGSYLSIYD QPVLPLQDPV
201: VDSIKNAVDR LTHSTNFLNF MAQHALIMQD DEDLLMLPPD EQAEKEEGRY HFMSLLLNLA NTFLYMVNTY IIVPTADDYS MSLGAAATVC GVVIGAMAVA
301: QLFSSVYFSA WSNKSYFKPL IFSSIVLFFG NLLYALAYDF NSLALLLIGR LFCGFGSARA VNRRYISDCV PLKIRMQASA GFVSASALGM ACGPALAGLL
401: QTDFKIKNVT FNQDTLPGWV MAVAWLLYLV WLAISFREPA REPEEIHTSQ ESTSADQDGN IEKGLKKPLL LASEETEHDE EDDGDGSEES SDDSRKPANS
501: FVAAYKLLTP SVKVQLLIYF MLKYAMEILL SESSVVTTYY FGWSMSSVSI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LASEIMVCIG IVLSFHVVIP
601: YTVPQYVISG FIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITLAGFLGQ SMLLNVTLLP SLIICVLSIL ATCYTYNSLY

Arabidopsis Description

SPX domain-containing membrane protein At4g11810 [Source:UniProtKB/Swiss-Prot;Acc:Q9T050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.