Factsheet for GSMUA_Achr5P10440_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	79.26	80.06
GSMUA_Achr1P18870_001	Banana	cytosol	76.56	77.11
Os04t0573000-01	Rice	plasma membrane	75.85	76.72
OQU82184	Sorghum	cytosol	74.86	75.72
Os02t0678200-01	Rice	plasma membrane	74.29	75.04
VIT_02s0025g04540.t01	Wine grape	extracellular	74.15	74.79
Zm00001d017597_P001	Maize	cytosol	72.59	73.84
TraesCS2D01G396700.1	Wheat	nucleus	73.15	73.57
TraesCS2B01G417200.1	Wheat	nucleus	73.01	73.43
HORVU6Hr1G065710.13	Barley	cytosol	72.73	73.35
TraesCS2A01G399200.1	Wheat	nucleus	72.87	73.29
EES07458	Sorghum	cytosol	72.44	73.28
HORVU2Hr1G094690.1	Barley	cytosol	73.15	73.26
TraesCS6B01G267800.1	Wheat	cytosol	72.16	73.2
PGSC0003DMT400032620	Potato	mitochondrion	72.16	73.2
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	72.16	73.09
TraesCS6D01G238500.1	Wheat	cytosol	72.02	73.05
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	72.16	72.88
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	71.88	72.81
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	73.44	72.41
TraesCS6A01G257300.1	Wheat	cytosol	71.73	72.35
KRH35227	Soybean	plasma membrane	70.88	71.59
KRG91596	Soybean	mitochondrion	70.31	71.02
Bra013668.1-P	Field mustard	mitochondrion	70.45	70.86
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	70.03	70.43
VIT_15s0048g01090.t01	Wine grape	cytosol	69.46	70.26
Bra027004.1-P	Field mustard	mitochondrion	68.61	69.3
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.28	69.26
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.04	68.72
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	68.47	68.66
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	69.03	68.64
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	52.13	67.96
AT4G11810.1	Thale cress	plasma membrane	67.9	67.61
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	60.8	67.51
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	66.19	66.86
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	65.34	66.0
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.08	63.61
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	52.84	62.31
GSMUA_AchrUn_...	Banana	cytosol	21.45	57.2
CDY41366	Canola	extracellular, golgi	11.65	51.57
PGSC0003DMT400056104	Potato	cytosol	12.64	51.45
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr5G10440_001	EnsemblPlants:GSMUA_Achr5P10440_001	EnsemblPlants:GSMUA_Achr5T10440_001	InterPro:IPR004331	InterPro:IPR020846
UniProt:M0SXC3	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105	PFAM:PF07690
PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF19	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000296D757	SEG:seg	:	:	:	:

Description

SPX domain-containing membrane protein Os04g0573000 [Source:GMGC_GENE;Acc:GSMUA_Achr5G10440_001]

Coordinates

chr5:-:7457562..7468133

Molecular Weight (calculated)

78541.4 Da

IEP (calculated)

7.317

GRAVY (calculated)

0.183

Length

704 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA DQVQEWRGYY INYKLMKKKL KQYVKHNQAG GELQQVLKEF SRMLDEQIEK IVLFLLEQQG LLASRIQELA KKRNILLEQP DISQILELQE
101: AYGAVGYDLI KLLKFVDMNA TGLRKILKKF DKRFGYKFTD YYVTSRANHP YSQLQQVFKH VGIGAVVGAL SRNLADLNVR RGSYLSIYDQ PSIVIKDPVI
201: DQINASVDKL THSTNFLQFL GQHALIVQED ITTAAEADVD EQKYHFMSLL LNLVNTFLYM ANTYIIVPTA DDYALSLGAA ATVCGVIIGS MAVAQVFSSV
301: YFSAWSNKSY FRPLIFSSIM LLMGNTLYAL AYDLNSIAIL LIGRLLCGLG SARAVNRRYI SDCVPLRTRM KASAGFVSAS ALGMACGPAI AGLLQTNFKI
401: YGLTFNQTTL PGWLMALAWL IYLFWLWISF REPAHDTQES HVSQDAHTGV KFGRNKKKRH PDSENGLAQP LLISQNEKQD EDEDQDCDDR EEASDESSHS
501: PATSIASAYR LLTPSVKVQL MIYFMLKYAM EILLSESSVV TTIYFNWSTS NVAIFLAILG LTVLPVNAII GSYITNMFED RQILLVSEII VLVGIIFSFR
601: VTSSYSVPQY VSSALITFVS AEVLEGVNLS LLSRVMSTRL ARGTYNGGLL STEAGTLARV VADGTITLAG YFGEDNILNI TLLPSLLICL ASISATFFTY
701: NNLY

Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.