Factsheet for TraesCS2B01G417200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G396700.1	Wheat	nucleus	99.14	99.14
TraesCS2A01G399200.1	Wheat	nucleus	98.29	98.29
HORVU2Hr1G094690.1	Barley	cytosol	96.57	96.16
Os04t0573000-01	Rice	plasma membrane	86.14	86.64
OQU82184	Sorghum	cytosol	83.43	83.91
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	82.29	80.67
TraesCS6B01G267800.1	Wheat	cytosol	76.14	76.8
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	68.14	75.24
GSMUA_Achr11P...	Banana	cytosol	73.14	73.46
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	73.43	73.01
VIT_02s0025g04540.t01	Wine grape	extracellular	69.71	69.91
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	69.29	69.78
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	69.0	69.5
PGSC0003DMT400032620	Potato	mitochondrion	68.29	68.88
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	68.43	68.72
KRH35227	Soybean	plasma membrane	68.29	68.58
KRG91596	Soybean	mitochondrion	67.86	68.15
Bra027004.1-P	Field mustard	mitochondrion	67.86	68.15
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	68.0	67.81
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	24.71	67.32
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	68.0	67.23
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.43	66.71
AT4G11810.1	Thale cress	plasma membrane	67.29	66.62
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	66.14	66.14
VIT_15s0048g01090.t01	Wine grape	cytosol	65.57	65.95
Bra013668.1-P	Field mustard	mitochondrion	65.71	65.71
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	49.43	64.07
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.86	64.05
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	62.86	63.13
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	62.29	62.55
TraesCS5B01G310500.1	Wheat	cytosol	60.86	61.47
PGSC0003DMT400056104	Potato	cytosol	12.29	49.71
CDY41366	Canola	extracellular, golgi	11.14	49.06
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF23	InterPro:SPX_dom
SUPFAM:SSF103473	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G417200	EnsemblPlants:TraesCS2B01G417200.1	TIGR:cd06174	TIGR:cd14479
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:596652837..596656254

Molecular Weight (calculated)

78198.5 Da

IEP (calculated)

5.962

GRAVY (calculated)

0.185

Length

700 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA DQVEEWKGYY INYKLMKKLL KQYVQQTQIG GKDCEQVLKE FSRILDDQIE RIVLFLLQQQ GHLSRRIEEL GAQRAAIMQQ VDTSRVFQLR
101: EDYRDVGRDL VKLLRFVDMN ATGLRKILKK FDKRFGYKFT DYYVTTRSNH PYSQLQQVFK QVGIVAVAGA LSRNLAYLEH EHRGSFLSIY DNPSVVLQDP
201: IIDQVNHAVQ KLTHATSFMQ YLGQHALIVQ DDTPSGSEDN VDDESYHFMS LMLNLVNTFL YMVNTYIIVP TADDYSVSLG AAATVCGIII GSMAVAQVFS
301: SVYFSAWSNR SYFRPLVFSS IMLFSGNLLY ALAYDLNSLT VLLIGRILCG LGSARAVNRR YISDCVPLKI RLQASAGFVS ASALGMACGP GLAGFLQTKF
401: TIYSLTFNQS TLPGWVMSVA WLLYLVWLWF SFKEPEHFAK AAAEAAARTP QPSESGHQES ANLEEGLAQP LLLGSEERLD DISEDNDDED DKSSHEPATS
501: FASAYKLLTP SVKVQLLIYF MLKYAMEILL SESSVVTTYY FNWDTSAVAI FLAILGLTVL PVNAIVGSYV TNWFEDRQIL AASEIMVLIG IIMSFRYTPH
601: YSIPQYVSSA LITFVFAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTLARVVADA TITAAGYLGT DMLLNVTLLP PLVITIVSIV ATFCTYNTLY

Best Arabidopsis Sequence Match ( AT1G63010.6 )
(BLAST)

001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.