Factsheet for Zm00001d002614_P004

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82184	Sorghum	cytosol	92.16	94.54
Os04t0573000-01	Rice	plasma membrane	83.61	85.78
TraesCS2D01G396700.1	Wheat	nucleus	81.09	82.71
TraesCS2B01G417200.1	Wheat	nucleus	80.67	82.29
TraesCS2A01G399200.1	Wheat	nucleus	80.67	82.29
HORVU2Hr1G094690.1	Barley	cytosol	80.81	82.08
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	72.69	81.86
Zm00001d017597_P001	Maize	cytosol	75.35	77.75
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	72.41	73.44
GSMUA_Achr11P...	Banana	cytosol	71.29	73.03
Zm00001d036020_P002	Maize	cytosol	70.59	72.1
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	68.91	70.79
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	68.77	70.65
VIT_02s0025g04540.t01	Wine grape	extracellular	68.91	70.49
PGSC0003DMT400032620	Potato	mitochondrion	67.65	69.6
KRG91596	Soybean	mitochondrion	67.65	69.3
KRH35227	Soybean	plasma membrane	67.23	68.87
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	66.81	68.44
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	24.37	67.7
Bra013668.1-P	Field mustard	mitochondrion	65.83	67.14
Bra027004.1-P	Field mustard	mitochondrion	65.27	66.86
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	65.55	66.86
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	65.69	66.81
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	66.11	66.67
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.99	66.57
AT4G11810.1	Thale cress	plasma membrane	65.55	66.2
VIT_15s0048g01090.t01	Wine grape	cytosol	64.15	65.8
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	70.17	65.4
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	48.46	64.07
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	61.76	63.27
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	59.52	62.87
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	60.78	62.27
PGSC0003DMT400056104	Potato	cytosol	12.04	49.71
CDY41366	Canola	extracellular, golgi	10.92	49.06
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

EntrezGene:100193704	MapMan:24.2.2.2.3	UniProt:A0A1D6E277	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS
InterPro:MFS_dom	InterPro:MFS_trans_sf	ProteinID:ONM14763.1	ProteinID:ONM14764.1	ProteinID:ONM14766.1	PFAM:PF03105
PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF23	InterPro:SPX_dom	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0004DE89F9	EnsemblPlantsGene:Zm00001d002614	EnsemblPlants:Zm00001d002614_P004	EnsemblPlants:Zm00001d002614_T004	SEG:seg

Description

SPX domain-containing membrane protein

Coordinates

chr2:-:16769959..16777172

Molecular Weight (calculated)

80271.4 Da

IEP (calculated)

6.577

GRAVY (calculated)

0.221

Length

714 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA DQVDEWKGYY INYKKSYQLF GLSISRYYIN YKLMKKMLKQ YVQQTQHDEK DREQVLKDFS RFLDDQIERI VLFLLQQQGH LASRIEKLAE
101: KRTALLEEYD ISQVYQLHDA YREVGLDLIK LLRFVDVNAT GIRKILKKFD KRFGYKFTDY YVTTRANHPY SQLQQVFKQV GIVAVVGALS RNLEYLQHHE
201: GSFVSIYDRP AVTLKDPIID QVNHAVQKLT HATNFMQFLG QHALIVQEDA ESESEDLVGD QSYHFMSLVL NLVNTFLYMV NTYIIVPTAD DYAVSLGAAA
301: TVCGIIIGSM AVAQVFSSVY FSAWSNKSYF KPLVFSSIML FLGNLLYALA YDLNSLIVLL TGRLLCGLGS ARAVNRRYIS DCVPLKMRLQ ASAGFVSASA
401: LGMACGPALA GFLQIKFKIY SLSFNQSTLP GWVMCISWLI YLLWLWLTFK EPEHFTKTLV NEQPSESGRQ GNSNLEAGLA EPLLQGIERR QDENSEVNDD
501: TEVESESSHE PATSIASAYR LLTPSVKAQL LIYFMLKYAM EILLSESSVV TTYYFSWSTS AVAIFLAILG LTVLPVNAIV GSYVTNLFED RQILLASEVM
601: VLIGIIMSFC FTPHYSIPQY VLSAFITFVF AEVLEGVNLS LLSRVMSSRL SRGTYNGGLL STEAGTLARV VADATITAAG YLGTDLLLNV TLLPSLVICI
701: VSIAAALYTY NNLY

Best Arabidopsis Sequence Match ( AT1G63010.6 )
(BLAST)

001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.