Factsheet for Zm00001d036020_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19184	Sorghum	cytosol	98.0	98.0
Os06t0129400-02	Rice	plasma membrane	94.56	94.7
TraesCS4A01G425300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	92.27	92.14
TraesCS7A01G063700.3	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	91.85	91.71
HORVU7Hr1G011890.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	91.7	91.57
Zm00001d045491_P003	Maize	cytosol, nucleus, plasma membrane	97.0	88.51
TraesCS7D01G058400.1	Wheat	cytosol	89.84	87.71
VIT_02s0025g04540.t01	Wine grape	extracellular	74.39	74.5
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	73.68	73.89
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	72.68	73.09
KRG91596	Soybean	mitochondrion	72.82	73.03
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	72.53	72.95
Zm00001d017597_P001	Maize	cytosol	72.1	72.83
PGSC0003DMT400032620	Potato	mitochondrion	71.82	72.33
KRH35227	Soybean	plasma membrane	71.82	72.02
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	71.67	71.57
Bra027004.1-P	Field mustard	mitochondrion	70.53	70.73
Bra013668.1-P	Field mustard	mitochondrion	70.82	70.71
Zm00001d002614_P004	Maize	cytosol, peroxisome, plasma membrane	72.1	70.59
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	70.53	70.23
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	70.96	70.06
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.81	70.01
VIT_15s0048g01090.t01	Wine grape	cytosol	69.38	69.68
AT4G11810.1	Thale cress	plasma membrane	70.24	69.45
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.32	68.87
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	65.67	65.85
Zm00001d026070_P002	Maize	cytosol, peroxisome, plasma membrane	59.51	65.62
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	64.81	64.99
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	50.07	64.81
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.52	63.61
CDY41366	Canola	extracellular, golgi	11.87	52.2
PGSC0003DMT400056104	Potato	cytosol	12.73	51.45
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	UniProt:A0A1D6LKC2	ProteinID:AQK80156.1	ProteinID:AQK80157.1	ncoils:Coil	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR004331
InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF03105	PFAM:PF07690
PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF19	InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI00022148A9	EnsemblPlantsGene:Zm00001d036020	EnsemblPlants:Zm00001d036020_P002	EnsemblPlants:Zm00001d036020_T002	SEG:seg	:

Description

SPX domain-containing membrane protein

Coordinates

chr6:+:66587806..66594109

Molecular Weight (calculated)

77638.4 Da

IEP (calculated)

6.675

GRAVY (calculated)

0.199

Length

699 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA DQIPEWKGYY INYKLMKKKV KQYGQQLQQG EKDRRRVLKD FSKMLDDQIE KIVLFLLEQQ GMLASRIEEL GKQRAILQDQ PDISGIAELR
101: EAYREVGIDL IKLLKFVDLN ATGIRKILKK FDKRFGYRFT DYYVTSRSNH PYSQLQQVFK HVGVGAVVGA LSRNLAELQE RQGSYLSIYD QPSSALKDPI
201: IDMINSSVDK LTRSTNFLRF LGQHALIVDE ESPSTAGEEE IEDQKYHFMS LMLNLVNTFL YMVNTYIIVP TADDYSVSLG AASTVCGVVI GSMAVAQIFS
301: SVYFSAWSNK SYFKPLVFSS IVLFLGNVCY AMAYDMKSLT VLIIGRLLCG MGSARAVNRR YISDCVPARI RMQASAGFVS ASALGMACGP ALAGLLQWKF
401: KIYMVTFNQS TLPGWVMAVA WLLYLIWLWV SFKEPNRATE VNEAPQNPAS GQTVDIGQVE NGLAQPLLMD SVDKQNEDED EEVDESEEAA DDSRKPATSI
501: GSAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITNHYF SWNTSAVAIF LAILGLTVLP VNAVVGTYIS NMFEDRQLLM VSQITLLVGI IFSFKVTSTY
601: SVVQYVVSAL VTFVSAEVLE GVNLSLLSSV MSSRLSRGTY NGGLLSTEAG TLARVVADCT ITAAGYLGVG KLLNVTLLPS LVICVASIAC TFLTYNSLF

Best Arabidopsis Sequence Match ( AT4G22990.2 )
(BLAST)

001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSEAVQDVN LEKGMKQPLL LTSEEIEEQG EDECDGSEEA SEDSRTPANS
501: ILAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITTYY FGWSTSSVAI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LVSEIMVCVG ILLSFHVVVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITVAGFFGR NMLLNVTLLP SLVICVLSIV ATCFTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.