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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036020_P002 Maize cytosol 94.7 94.56
KXG19184 Sorghum cytosol 94.41 94.28
TraesCS7A01G063700.3 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 92.41 92.14
HORVU7Hr1G011890.1 Barley cytosol, mitochondrion, peroxisome, plasma membrane 92.26 92.0
TraesCS4A01G425300.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 92.12 91.86
TraesCS7D01G058400.1 Wheat cytosol 89.83 87.57
Zm00001d045491_P003 Maize cytosol, nucleus, plasma membrane 93.7 85.38
VIT_02s0025g04540.t01 Wine grape extracellular 75.07 75.07
Os04t0573000-01 Rice plasma membrane 74.64 74.86
KRH38329 Soybean cytosol, peroxisome, plasma membrane 73.5 73.81
KRH08812 Soybean cytosol, peroxisome, plasma membrane 73.35 73.67
Os02t0678200-01 Rice plasma membrane 73.5 73.6
PGSC0003DMT400058570 Potato cytosol, peroxisome, plasma membrane 73.35 73.46
KRG91596 Soybean mitochondrion 73.21 73.31
KRH35227 Soybean plasma membrane 72.49 72.6
PGSC0003DMT400032620 Potato mitochondrion 71.92 72.33
AT4G22990.3 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 71.49 71.29
Bra013668.1-P Field mustard mitochondrion 70.77 70.57
Bra027004.1-P Field mustard mitochondrion 70.06 70.16
Bra036635.1-P Field mustard cytosol, mitochondrion, nucleus, peroxisome 70.49 70.09
Bra014869.1-P Field mustard cytosol, peroxisome, plasma membrane 69.77 69.87
AT1G63010.5 Thale cress cytosol, mitochondrion, peroxisome, plasma membrane 70.77 69.77
VIT_15s0048g01090.t01 Wine grape cytosol 69.2 69.4
AT4G11810.1 Thale cress plasma membrane 69.91 69.02
PGSC0003DMT400010867 Potato extracellular, plasma membrane, vacuole 25.07 68.09
KRH40511 Soybean cytosol, mitochondrion, nucleus, plasma membrane 65.76 65.85
KRH00680 Soybean cytosol, mitochondrion, nucleus, plasma membrane 65.33 65.42
Os09t0521800-00 Rice cytosol, peroxisome 63.75 64.49
PGSC0003DMT400000009 Potato cytosol, peroxisome, plastid 49.57 64.07
Bra034426.1-P Field mustard cytosol, nucleus, plasma membrane 61.6 63.61
CDY41366 Canola extracellular, golgi 12.46 54.72
PGSC0003DMT400056104 Potato cytosol 12.46 50.29
Solyc02g043960.1.1 Tomato extracellular 0.0 0.0
Protein Annotations
MapMan:24.2.2.2.3EntrezGene:4339994EMBL:AK243620ProteinID:BAD44792.1ProteinID:BAF18595.2ProteinID:BAS95961.1
ProteinID:EAZ35695.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:IPR004331InterPro:IPR020846InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sf
EnsemblPlantsGene:Os06g0129400EnsemblPlants:Os06t0129400-02PFAM:PF03105PFAM:PF07690PFscan:PS51382PANTHER:PTHR23510
PANTHER:PTHR23510:SF19UniProt:Q658H5InterPro:SPX_domSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000043A0BC
RefSeq:XP_015643652.1SEG:seg::::
Description
SPX-MFS protein 3, SPX-Major Facility Superfamily3Splicing variant of SPX-MFS protein 3 (Os06t0129400-01);Vacuolar phosphate efflux transporter, Pi homeostasis (Os06t0129400-02)
Coordinates
chr6:+:1554861..1561163
Molecular Weight (calculated)
77654.4 Da
IEP (calculated)
8.372
GRAVY (calculated)
0.170
Length
698 amino acids
Sequence
(BLAST)
001: MVNFGKKLMA DQIPEWKGYY INYKLMKKKV KQYGQQVQQG EKDRRRVLKD FSKMLDDQIE KIVLFLLEQQ GALASRIEKL GKQRAILAEQ PDISAIAELR
101: EAYREVGLDL IKLLKFVDLN ATGIRKILKK FDKRFGYRFT DYYVTSRSNH PYSQLQQVFK HVGVGAVVGA LSRNLADLQE RQGSYLSIYD QPSTALKDPI
201: IDMINSSVDK LTRSTNFLRF LGQHALIVGE ESPSTAEEEE IEDQKYHFMS LMLNLVNTFL YMVNTYIIVP TADDYSVSLG AASTVCGVVI GSMAVAQIFS
301: SVYFSAWSNK SYFRPLIFSS IVLFLGNVCY AMAYDMKSLT VLIIGRLLCG MGSARAVNRR YISDCVPARI RMQASAGFVS ASALGMACGP ALAGLLQWKF
401: KIYMVTFNQS TLPGWVMAVA WLLYLVWLWI SFKEPNRATE VNGTQQNPAS VQRADIEQLE NGLAQPLLRD SSKKDEDDDE EVDDSEEGTH DSRKPATSIG
501: SAYRLLTPSV KVQLLIYFML KYAMEILLSE SSVITNHYFN WNTSAVAIFL AILGLTVLPV NAVVGTYISN MFEDRQLLMV SQITLLVGII FSFKITSTYS
601: VVQYVVSALV TFVSAEVLEG VNLSLLSSVM SSRLSRGTYN GGLLSTEAGT LARVVADCTI TAAGYLGIGK LLNVTLLPSL VICAASIAST FLTYNSLF
Best Arabidopsis Sequence Match ( AT4G22990.1 )
(BLAST)
001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY
Arabidopsis Description
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.