Factsheet for TraesCS6D01G238500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G267800.1	Wheat	cytosol	98.99	98.99
TraesCS6A01G257300.1	Wheat	cytosol	97.41	96.85
HORVU6Hr1G065710.13	Barley	cytosol	95.1	94.56
Os02t0678200-01	Rice	plasma membrane	85.3	84.94
Zm00001d017597_P001	Maize	cytosol	81.99	82.23
EES07458	Sorghum	cytosol	81.7	81.47
TraesCS2D01G396700.1	Wheat	nucleus	76.51	75.86
GSMUA_Achr11P...	Banana	cytosol	73.49	73.17
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	73.05	72.02
VIT_02s0025g04540.t01	Wine grape	extracellular	71.18	70.77
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	70.03	69.93
KRG91596	Soybean	mitochondrion	69.6	69.3
KRH35227	Soybean	plasma membrane	69.45	69.15
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	69.16	69.06
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	69.31	69.01
TraesCS7D01G058400.1	Wheat	cytosol	70.03	67.88
PGSC0003DMT400032620	Potato	mitochondrion	67.87	67.87
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.07	67.7
VIT_15s0048g01090.t01	Wine grape	cytosol	67.44	67.24
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.44	67.14
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	67.0	66.43
Bra013668.1-P	Field mustard	mitochondrion	67.0	66.43
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	67.0	66.24
AT4G11810.1	Thale cress	plasma membrane	67.44	66.2
Bra027004.1-P	Field mustard	mitochondrion	66.43	66.14
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	67.29	65.96
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	50.58	65.0
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.26	64.94
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.98	63.7
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.69	63.41
TraesCS5D01G316800.1	Wheat	cytosol, peroxisome, plasma membrane	62.25	62.25
PGSC0003DMT400056104	Potato	cytosol	13.11	52.6
CDY41366	Canola	extracellular, golgi	10.95	47.8
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF23	InterPro:SPX_dom
SUPFAM:SSF103473	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G238500	EnsemblPlants:TraesCS6D01G238500.1	TIGR:cd06174	TIGR:cd14479
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:338898034..338901165

Molecular Weight (calculated)

76848.0 Da

IEP (calculated)

7.878

GRAVY (calculated)

0.201

Length

694 amino acids

Sequence
(BLAST)

001: MVNFGKVLAS DQLEEWKEYY INYKMMKKKV KQYVQQTQDG GRNHEQVLKE FSRMLDEQIE KVVLFLLTQQ GHLASRLEKL GQQRAILTEH SDISQVSQVR
101: EAYRQVGLDL VKLLRFVDMN ATGIRKILKK FDKRFGYRFT DYYVSTRANH PYSQLQPIFK QVGIVAVAGA LTRNLASLQD HQGSFISIYD HPSITLKDPV
201: IEQINNSVQK LTHSTTFLTF LGQHAMIIPE DVQTSSEDLV DDQSYHFMSL MLNLVNTFLY MVNTYIIVPT ADDYSVSLGA AATVCGVIIG SMAVAQVFSS
301: VYFSAWSNRS YFRPLVFSSI MLFSGNVLYA LAYDLNSLTV LILGRLLCGL GSARAVNRRY ISDCVPLKIR LKASAGFVSA SALGMACGPA LAGLLQTEFK
401: IYAVTFNQNT LPGWIMSLAW VGNLIWLWIS FKEPDHFAKE NAVNTQSSDS GHGRNDNLEG GLAQPLLTEA KERQGENADN NENDPKESHK AATSIAAAYR
501: LLTPSVKVQL LIYFMLKFAM EILLSESSVV TTFYFNWSTS TVAIFLAVLG LTVLPVNVIV GSYITNLFQD RQILVASEIM VLIGIASSFH FGSSYCVAQY
601: VVSALITFVF AEVLEGVNLS LLSRVMSSRL SRGTYNGGLL STEAGTLARV AADMTITAAG YLGQSQLLNA TLLPSLVICV ASIAATFGTY NTLY

Best Arabidopsis Sequence Match ( AT1G63010.6 )
(BLAST)

001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.