Factsheet for TraesCS5D01G316800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G080250.1	Barley	cytosol	96.97	96.97
TraesCS5B01G310500.1	Wheat	cytosol	96.4	96.54
TraesCS5A01G309800.1	Wheat	cytosol	96.25	96.39
Os09t0521800-00	Rice	cytosol, peroxisome	76.08	76.52
GSMUA_Achr1P18870_001	Banana	cytosol	67.72	67.24
TraesCS7D01G058400.1	Wheat	cytosol	66.28	64.25
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	64.12	63.85
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	23.63	63.81
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	63.83	63.74
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	63.69	63.6
VIT_02s0025g04540.t01	Wine grape	extracellular	63.83	63.47
KRG91596	Soybean	mitochondrion	63.4	63.13
KRH35227	Soybean	plasma membrane	63.26	62.98
PGSC0003DMT400032620	Potato	mitochondrion	62.82	62.82
Bra027004.1-P	Field mustard	mitochondrion	62.97	62.7
TraesCS6D01G238500.1	Wheat	cytosol	62.25	62.25
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	62.54	61.82
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	62.68	61.44
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.67	61.41
AT4G11810.1	Thale cress	plasma membrane	62.54	61.39
TraesCS2D01G396700.1	Wheat	nucleus	61.67	61.14
Bra013668.1-P	Field mustard	mitochondrion	61.53	61.0
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	61.1	60.57
VIT_15s0048g01090.t01	Wine grape	cytosol	59.37	59.2
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	45.82	58.89
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	50.43	58.63
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	57.93	57.68
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	57.49	57.25
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	55.62	57.1
CDY41366	Canola	extracellular, golgi	9.8	42.77
PGSC0003DMT400056104	Potato	cytosol	10.09	40.46
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF19	InterPro:SPX_dom	SUPFAM:SSF103473
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G316800	EnsemblPlants:TraesCS5D01G316800.1	TIGR:cd06174	TIGR:cd14479	SEG:seg

Description

No Description!

Coordinates

chr5D:-:410420325..410422850

Molecular Weight (calculated)

76178.0 Da

IEP (calculated)

6.209

GRAVY (calculated)

0.203

Length

694 amino acids

Sequence
(BLAST)

001: MVNFSKKLTT DQVPGWEEYY FNYKLLKARV KVYTVQTKQG NHDRRRVLKD FSKLLDDEIE KIVLFMIEQQ GLIAARLEEL GKRRAVLEDI PLLQEITELR
101: EDYRAVGHDL VRLLRFVDLN ANAVRKILKK FDERLGYKFT DYYVRSRSNH PYSQLQQVFK HVGIGAVVGA LSRNLGDLEE REGSYLNIYD QNPLAIPKDP
201: IIDMIKATAD KLTNSTNFLR FLGQHALIRQ GSIADDSPEE QQVSEDKYHF ISLVLNLANT FLYMVNTYIV VPTADDYATS LGAAATVCGV IIGSMAVAQL
301: FSSVYFSAWS NRSYFRPLLF SSVVLLLGNV MYALAYDLDS LAILLAGRVL CGMGSARAVN RRYISDCVPQ RIRMQASAAF VSASALGMAC GPAIAGLLQV
401: NYRVYAVTIN QDTLPGWVMA FGWLAYLVWL WISFKEPVLG DADEEGRRQG SSGGSSSLGY RKQGLAGEYL LKQDAQGESD QEETPAPAAA PSIGEAYGLL
501: TPSVKVQLLI YFMLKFSMEI LLSESSVVTS YYFGWNTSSV AVFLAALGLT VLPINAVVGT YISNMFEDRQ ILVASEAVLL AGVALSFHVP GTAYTAAQYV
601: CSALLTFVAA EVLEGVNLSL LSQVMPARLS RGTWNGGLLS TEAGTLARVA ADGTITLAGY LGQGALLNAT LLPSLLICAA SIAATLSTYN SLFY

Best Arabidopsis Sequence Match ( AT4G11810.1 )
(BLAST)

001: MVAFGKKLKE RSIEEWQEYY INYKLMKKKV KQYGPQIEVG SLDRRHVLKD FSRMLDHQIE KIALFMLEQQ GLLSSRLQKL REWHDTLQDE PDLSQIAKLR
101: EAYRAVGQDL LKLLFFIDMN AIGIRKILKK FDKRFGYRFT NYYVKTRADH PYSQLQQVFR HVGLGAVVGA ISRNLHELQN NEGSYLSIYD QPVLPLQDPV
201: VDSIKNAVDR LTHSTNFLNF MAQHALIMQD DEDLLMLPPD EQAEKEEGRY HFMSLLLNLA NTFLYMVNTY IIVPTADDYS MSLGAAATVC GVVIGAMAVA
301: QLFSSVYFSA WSNKSYFKPL IFSSIVLFFG NLLYALAYDF NSLALLLIGR LFCGFGSARA VNRRYISDCV PLKIRMQASA GFVSASALGM ACGPALAGLL
401: QTDFKIKNVT FNQDTLPGWV MAVAWLLYLV WLAISFREPA REPEEIHTSQ ESTSEQIFCG EADQDGNIEK GLKKPLLLAS EETEHDEEDD GDGSEESSDD
501: SRKPANSFVA AYKLLTPSVK VQLLIYFMLK YAMEILLSES SVVTTYYFGW SMSSVSIFLF CLGLTVLPVN LVVGSYISNM FEDRQILLAS EIMVCIGIVL
601: SFHVVIPYTV PQYVISGFIM FVSAEVLEGV NLSLLSRVMS SRLSRGTYNG GLLSTEAGTI ARVIADATIT LAGFLGQSML LNVTLLPSLI ICVLSILATC
701: YTYNSLY

Arabidopsis Description

SPX domain-containing membrane protein At4g11810 [Source:UniProtKB/Swiss-Prot;Acc:Q9T050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.