CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017597_P001	Maize	cytosol	93.1	93.64
Os02t0678200-01	Rice	plasma membrane	85.92	85.8
HORVU6Hr1G065710.13	Barley	cytosol	82.47	82.23
TraesCS6B01G267800.1	Wheat	cytosol	81.75	81.99
TraesCS6D01G238500.1	Wheat	cytosol	81.47	81.7
TraesCS6A01G257300.1	Wheat	cytosol	81.75	81.52
OQU82184	Sorghum	cytosol	76.87	76.87
GSMUA_Achr11P...	Banana	cytosol	73.71	73.6
GSMUA_Achr5P10440_001	Banana	cytosol, nucleus, plasma membrane	73.28	72.44
KXG19184	Sorghum	cytosol	72.41	72.1
VIT_02s0025g04540.t01	Wine grape	extracellular	71.12	70.92
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	70.4	70.5
KRG91596	Soybean	mitochondrion	70.11	70.01
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	69.54	69.64
KRH35227	Soybean	plasma membrane	69.4	69.3
PGSC0003DMT400010867	Potato	extracellular, plasma membrane, vacuole	25.43	68.87
PGSC0003DMT400058570	Potato	cytosol, peroxisome, plasma membrane	68.97	68.87
Bra036635.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	69.25	68.66
Bra027004.1-P	Field mustard	mitochondrion	68.68	68.58
PGSC0003DMT400032620	Potato	mitochondrion	68.25	68.44
Bra014869.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.96	67.86
Bra013668.1-P	Field mustard	mitochondrion	67.82	67.43
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	68.25	67.09
AT4G22990.3	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	67.24	66.86
AT4G11810.1	Thale cress	plasma membrane	67.82	66.76
VIT_15s0048g01090.t01	Wine grape	cytosol	65.95	65.95
Bra034426.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.93	64.79
PGSC0003DMT400000009	Potato	cytosol, peroxisome, plastid	50.0	64.44
KRH40511	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.51	63.41
KRH00680	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	63.07	62.98
CDY41366	Canola	extracellular, golgi	11.93	52.2
PGSC0003DMT400056104	Potato	cytosol	12.5	50.29
Solyc02g043960.1.1	Tomato	extracellular	0.0	0.0

Protein Annotations

MapMan:24.2.2.2.3	EntrezGene:8073220	UniProt:C5Y0Z6	EnsemblPlants:EES07458	ProteinID:EES07458	ProteinID:EES07458.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	ProteinID:OQU85638.1
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF23	EnsemblPlantsGene:SORBI_3004G282900
InterPro:SPX_dom	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0001A86280	RefSeq:XP_002454482.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:62464529..62469881

Molecular Weight (calculated)

77661.4 Da

IEP (calculated)

7.975

GRAVY (calculated)

0.181

Length

696 amino acids

Sequence
(BLAST)

001: MVNFGKKLMA DQLEEWREYY INYKMMKKKV KQYVQQTQTG GKNRDQVLKE FSRMLDDQIE KVVLFLLQQQ GHLARRIEKL GVQRAMLMQQ SDVSQICQLR
101: QAYREVGYDL VKLLRFLDMN ATGIRKILKK FDKRFGYKFT DYYVSTRANH PYSQLQQIFK QVGVVAVVGA LSRNLAYLQD HQGYLANIYD YPSLILKDPV
201: IEQINHSVQK LTHSTSFLQF LGQHALIVPE DMQSGSDLDD DKDYHFLSLL LNLVNTFLYM VNTYIIVPTA DDYSVSLGAA ATVCGVIIGS MAVAQIFSSV
301: YFSAWSNKSY FRPLVFSSIM LFLGNLLYAL AYDLNSLTAL IVGRLLCGLG SARAVNRRYI SDCVPLKSRM QASAGFVSAS ALGMACGPGL AGLLQTKFKI
401: YGLTFNQNTL PGWVMCVAWL AYLFWLWISF KEPGHIASEN SVNTQSSDSG RPVSGNLEDG VREPLLIDAK AGPDDDVEDN DDNDDDPEES HRPATSLAAA
501: YRLLTPSVKV QLLIYFMLKF AMEILLSESS VVTTFYFKWT TSTVAIFLAV LGLTVLPVNV IVGSYVTNLF QDRQILVASE IMVLIGIVMS FRFTPHYSVP
601: QYVTSALITF VFAEVLEGVN LSLLSRVMSS RLSRGTYNGG LLSTEAGTLA RVAADMTITA AGNLGQSRLL NATLLPSLVI CLASIVATFC TYNSLY

Best Arabidopsis Sequence Match ( AT1G63010.1 )
(BLAST)

001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.