Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g050320.1.1 | Tomato | cytosol | 36.36 | 87.5 |
| Solyc10g050310.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 29.44 | 37.57 |
| Solyc08g044470.1.1 | Tomato | cytosol | 22.08 | 37.5 |
| Solyc04g026050.1.1 | Tomato | extracellular | 21.21 | 35.0 |
| CDX73315 | Canola | mitochondrion | 6.93 | 12.31 |
| Solyc01g091870.2.1 | Tomato | cytosol | 20.35 | 6.73 |
| KRH00680 | Soybean | cytosol, mitochondrion, nucleus, plasma membrane | 14.29 | 4.73 |
| KRH40511 | Soybean | cytosol, mitochondrion, nucleus, plasma membrane | 14.29 | 4.73 |
| Bra034426.1-P | Field mustard | cytosol, nucleus, plasma membrane | 12.55 | 4.29 |
| Solyc08g007800.2.1 | Tomato | unclear | 11.69 | 4.04 |
| Solyc08g080200.2.1 | Tomato | unclear | 11.26 | 3.87 |
| CDY28410 | Canola | golgi, nucleus, plasma membrane | 8.23 | 3.86 |
| Solyc12g056440.1.1 | Tomato | unclear | 11.26 | 3.73 |
| Solyc02g043960.1.1 | Tomato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc12g082710.1.1 | EnsemblPlantsGene:Solyc12g082710.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR23510 |
| PANTHER:PTHR23510:SF21 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000276A82D | UniProt:K4DGJ1 | MapMan:35.2 |
Description
No Description!
Coordinates
chr12:-:16701466..16702646
Molecular Weight (calculated)
26388.0 Da
IEP (calculated)
4.504
GRAVY (calculated)
0.165
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGKLQNIST EATSITAEGM QPICQLIKNQ GQFLANLKDN KGNFTLIYDH SGLPFHDLII DFINEVVNRL TNLTDFLYYL VKHALNLPEE LPTLFEDHAA
101: NERYIMVLLV GNTLYVLAYD FNSIYLLLVG RLFCGLGLSR VVKALIVFLC TCWIVAPVWF VYMLWLCTTF REPPMLELED VLLPKSNSKK IENDLLHKGI
201: TQTFLLCAEE TKQDEDDDQD CDNHSVLSNS F
101: NERYIMVLLV GNTLYVLAYD FNSIYLLLVG RLFCGLGLSR VVKALIVFLC TCWIVAPVWF VYMLWLCTTF REPPMLELED VLLPKSNSKK IENDLLHKGI
201: TQTFLLCAEE TKQDEDDDQD CDNHSVLSNS F
001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSAVQDVNL EKGMKQPLLL TSEEIEEQGE DECDGSEEAS EDSRTPANSI
501: LAAYRLLTPS VKVQLLIYFM LKYAMEILLS ESSVITTYYF GWSTSSVAIF LFCLGLTVLP VNLVVGSYIS NMFEDRQILL VSEIMVCVGI LLSFHVVVPY
601: TVPQYVCSGL IMFVSAEVLE GVNLSLLSRV MSSRLSRGTY NGGLLSTEAG TIARVIADAT ITVAGFFGRN MLLNVTLLPS LVICVLSIVA TCFTYNSLY
Arabidopsis Description
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.