Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g026050.1.1 | Tomato | extracellular | 60.29 | 58.57 |
| Solyc10g050310.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 34.56 | 25.97 |
| Solyc12g082710.1.1 | Tomato | cytosol | 37.5 | 22.08 |
| CDY28410 | Canola | golgi, nucleus, plasma membrane | 22.79 | 6.3 |
| Solyc01g091870.2.1 | Tomato | cytosol | 27.21 | 5.3 |
| Solyc12g056440.1.1 | Tomato | unclear | 25.74 | 5.02 |
| Solyc08g007800.2.1 | Tomato | unclear | 24.26 | 4.93 |
| Solyc08g080200.2.1 | Tomato | unclear | 24.26 | 4.91 |
| Bra034426.1-P | Field mustard | cytosol, nucleus, plasma membrane | 24.26 | 4.88 |
| KRH00680 | Soybean | cytosol, mitochondrion, nucleus, plasma membrane | 25.0 | 4.88 |
| KRH40511 | Soybean | cytosol, mitochondrion, nucleus, plasma membrane | 25.0 | 4.88 |
| Solyc10g050320.1.1 | Tomato | cytosol | 1.47 | 2.08 |
| CDX73315 | Canola | mitochondrion | 0.0 | 0.0 |
| Solyc02g043960.1.1 | Tomato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc08g044470.1.1 | EnsemblPlantsGene:Solyc08g044470.1 | PANTHER:PTHR23510 | PANTHER:PTHR23510:SF21 | SEG:seg | UniParc:UPI000276C465 |
| UniProt:K4CKA4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:20203723..20204931
Molecular Weight (calculated)
15437.1 Da
IEP (calculated)
4.203
GRAVY (calculated)
-0.589
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MELEEEVKEE TYFFLDCDLD CRSWRGLRKG SFLGFSEPPM LELEDVMLPK SDTEKIENDL VHKGITQPFL LCAEETKQDE DDDQDFAEVL EDVNHKLLSQ
101: AMSSKHSKGT YNGGLLSTEA GTLDRVFGQK VNSVKV
101: AMSSKHSKGT YNGGLLSTEA GTLDRVFGQK VNSVKV
001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SDRVESSRVE EGLRLPLLIT SGIKPEDEEE CDESEESPED SHKPANSFIE
501: AYRLLTPSVK VQLLIYFMLK YSMEILLSES SVITSYYFSW TTSSVAIFLA CLGLTVLPIN ILVGSYISNM FEDRQILLTS EIIVFLGILF SFNLFVPYTV
601: PQYVISGLIM FVAAEVLEGV NLSLLSRVMS SRLSKGTYNG GLLSTEAGTL ARVVADATIT LGGYLGRGHL LNATLLPSLV ICIGSIVATC CTYNSLY
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SDRVESSRVE EGLRLPLLIT SGIKPEDEEE CDESEESPED SHKPANSFIE
501: AYRLLTPSVK VQLLIYFMLK YSMEILLSES SVITSYYFSW TTSSVAIFLA CLGLTVLPIN ILVGSYISNM FEDRQILLTS EIIVFLGILF SFNLFVPYTV
601: PQYVISGLIM FVAAEVLEGV NLSLLSRVMS SRLSKGTYNG GLLSTEAGTL ARVVADATIT LGGYLGRGHL LNATLLPSLV ICIGSIVATC CTYNSLY
Arabidopsis Description
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.