Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g044470.1.1 | Tomato | cytosol | 58.57 | 60.29 |
| Solyc10g050310.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 35.71 | 27.62 |
| Solyc12g082710.1.1 | Tomato | cytosol | 35.0 | 21.21 |
| CDY28410 | Canola | golgi, nucleus, plasma membrane | 27.86 | 7.93 |
| Solyc01g091870.2.1 | Tomato | cytosol | 30.71 | 6.16 |
| Bra034426.1-P | Field mustard | cytosol, nucleus, plasma membrane | 28.57 | 5.92 |
| Solyc08g080200.2.1 | Tomato | unclear | 27.14 | 5.65 |
| KRH00680 | Soybean | cytosol, mitochondrion, nucleus, plasma membrane | 27.14 | 5.45 |
| KRH40511 | Soybean | cytosol, mitochondrion, nucleus, plasma membrane | 27.14 | 5.45 |
| Solyc08g007800.2.1 | Tomato | unclear | 25.71 | 5.38 |
| Solyc12g056440.1.1 | Tomato | unclear | 26.43 | 5.31 |
| Solyc10g050320.1.1 | Tomato | cytosol | 0.71 | 1.04 |
| CDX73315 | Canola | mitochondrion | 0.0 | 0.0 |
| Solyc02g043960.1.1 | Tomato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc04g026050.1.1 | EnsemblPlantsGene:Solyc04g026050.1 | PANTHER:PTHR23510 | PANTHER:PTHR23510:SF21 | UniParc:UPI0002765E25 | UniProt:K4BR47 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:19105121..19105650
Molecular Weight (calculated)
15794.1 Da
IEP (calculated)
4.165
GRAVY (calculated)
0.227
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNGSCMVCY ILCLWTTFRE PPILELEDVL LLKSNSEKIQ NDLVHKGIIQ PFLLCAEETK QAEDDDQDFF SFYVAIPYFV PQYVCSALIT FLVVEVLEDV
101: NLKLLSQAIS SQHSKGTYNC GLLSTEAGTL DRVFGQKCIL
101: NLKLLSQAIS SQHSKGTYNC GLLSTEAGTL DRVFGQKCIL
001: MVAFGKKLKE RSIQEWQGYY INYKLMKKKV KQYSRQLEGG NLERRHVLKD FSRMLDNQIE KIALFMLEQQ GLLASRLQTL RGSHDALQEQ PDISHMSYLK
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSEAVQDVN LEKGMKQPLL LTSEEIEEQG EDECDGSEEA SEDSRTPANS
501: ILAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITTYY FGWSTSSVAI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LVSEIMVCVG ILLSFHVVVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITVAGFFGR NMLLNVTLLP SLVICVLSIV ATCFTYNSLY
101: EEYRAVGQDL LKLLFFVEMN AIGIRKILKK FDKRFGYRFT NYYVKTRANH PYSELQQVFR HVGLGAVVGA VSRNLHELQN NQGSYLSIYD QPVLPLQDPV
201: VDSIRAAVDR LTRSTNFLHF MAQHALIMQE ELPSPQDEEG EEEDGRYHFM SLLLNLVNTF LYMVNTYIIV PTADDYSMSL GAAATVCGVV IGAMAVAQLF
301: SSVYFSAWSN RSYFKPLIFS SIVLFIGNLL YALAFDFNSI AVLLIGRLFC GLGSARAVNR RYISDCVPLK IRMQASAGFV SASALGMACG PALAGLLQIR
401: FKIYKLTFNQ DTLPGWVMAV AWLIYLVWLA ISFREPAREP EEIPKTSEES NHSEAVQDVN LEKGMKQPLL LTSEEIEEQG EDECDGSEEA SEDSRTPANS
501: ILAAYRLLTP SVKVQLLIYF MLKYAMEILL SESSVITTYY FGWSTSSVAI FLFCLGLTVL PVNLVVGSYI SNMFEDRQIL LVSEIMVCVG ILLSFHVVVP
601: YTVPQYVCSG LIMFVSAEVL EGVNLSLLSR VMSSRLSRGT YNGGLLSTEA GTIARVIADA TITVAGFFGR NMLLNVTLLP SLVICVLSIV ATCFTYNSLY
Arabidopsis Description
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JMQ7]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.