Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73315 | Canola | mitochondrion | 20.29 | 21.54 |
| CDY64893 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 86.96 | 17.09 |
| CDY66560 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 86.23 | 16.95 |
| CDY45970 | Canola | mitochondrion | 84.78 | 16.79 |
| CDY45470 | Canola | mitochondrion | 84.06 | 16.71 |
| AT1G63010.5 | Thale cress | cytosol, mitochondrion, peroxisome, plasma membrane | 81.88 | 15.96 |
| VIT_02s0025g04540.t01 | Wine grape | extracellular | 73.91 | 14.61 |
| CDX86744 | Canola | cytosol, peroxisome, plasma membrane | 70.29 | 13.78 |
| CDY13281 | Canola | cytosol, peroxisome, plasma membrane | 69.57 | 13.64 |
| KRG91596 | Soybean | mitochondrion | 68.12 | 13.49 |
| KRH35227 | Soybean | plasma membrane | 68.12 | 13.49 |
| KRH08812 | Soybean | cytosol, peroxisome, plasma membrane | 67.39 | 13.38 |
| KRH38329 | Soybean | cytosol, peroxisome, plasma membrane | 67.39 | 13.38 |
| CDY10843 | Canola | mitochondrion | 66.67 | 13.24 |
| CDY41259 | Canola | mitochondrion | 66.67 | 13.14 |
| CDY28410 | Canola | golgi, nucleus, plasma membrane | 5.07 | 1.42 |
| CDY41366 | Canola | extracellular, golgi | 0.0 | 0.0 |
| CDX93857 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX71233 | EnsemblPlantsGene:GSBRNA2T00144818001 | InterPro:IPR004331 | InterPro:SPX_dom | PANTHER:PTHR23510 | PANTHER:PTHR23510:SF55 |
| PFscan:PS51382 | ProteinID:CDX71233 | ProteinID:CDX71233.1 | SEG:seg | UniParc:UPI0004EC2B22 | MapMan:24.2.2.2.3 |
Description
BnaC07g05120D
Coordinates
chrLK031792:+:1564763..1565393
Molecular Weight (calculated)
16249.8 Da
IEP (calculated)
10.320
GRAVY (calculated)
-0.525
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKKKVKQYG EQIRGCSQHP RHVLKDFSRM LDTQIEKTVF FMLEQQGLLA GRLATLRETH DALRESYRDV GRDLLQLLVL VELNAISLRK ILKKFDKRFG
101: YRFADYYVKT RANHPYSQSP YNAWSSNRKA ACYLSPCL
101: YRFADYYVKT RANHPYSQSP YNAWSSNRKA ACYLSPCL
001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY
Arabidopsis Description
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.