CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027004.1-P	Field mustard	mitochondrion	99.0	99.0
CDY45470	Canola	mitochondrion	97.27	97.69
CDY64893	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	94.83	94.16
CDY66560	Canola	cytosol, mitochondrion, nucleus, peroxisome	94.69	94.02
CDX93857	Canola	endoplasmic reticulum, extracellular	12.2	90.43
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	91.39	89.97
CDX71233	Canola	nucleus	16.79	84.78
CDY10843	Canola	mitochondrion	76.61	76.83
VIT_02s0025g04540.t01	Wine grape	extracellular	76.9	76.79
CDX86744	Canola	cytosol, peroxisome, plasma membrane	77.33	76.56
CDY41259	Canola	mitochondrion	76.47	76.14
CDY13281	Canola	cytosol, peroxisome, plasma membrane	76.9	76.14
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	74.89	75.11
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	74.61	74.82
KRG91596	Soybean	mitochondrion	74.46	74.46
KRH35227	Soybean	plasma membrane	74.03	74.03
CDX73315	Canola	mitochondrion	12.91	69.23
CDY28410	Canola	golgi, nucleus, plasma membrane	45.62	64.63
CDY41366	Canola	extracellular, golgi	12.05	52.83

Protein Annotations

MapMan:24.2.2.2.3	GO:A0A078I516	UniProt:A0A078I516	EnsemblPlants:CDY45970	ProteinID:CDY45970	ProteinID:CDY45970.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00082982001	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	InterPro:SPX_dom
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EDD8B8	SEG:seg	:	:

Description

BnaA09g12960DBnaA09g12960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I516]

Coordinates

chrLK032644:-:109924..113923

Molecular Weight (calculated)

78093.9 Da

IEP (calculated)

7.183

GRAVY (calculated)

0.164

Length

697 amino acids

Sequence
(BLAST)

001: MVAFGKYLQR KQIEEWRGYY INYKLMKQKV KQYAEQIRGG SQHPRHVLKD FSRMLDTQIE KTVLFMLEQQ GLLGGRLSTL RETHDAVLEQ PDISKIVALR
101: ESYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPLQDPV
201: VDAIKTAVDK LTNSTSFLNF LAQHALIMQD DLQTPSEDTI DERTYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSITL LLLGRLCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA IAGLLQIKFK
401: FYKLTFNQST LPGWVMAVAW LFYLVWLCIS FKEPLRDTEE QEEQERSKRN ETTSMTNRVE EGIRKPLLIT SGILPDDEED CDESEESADE SRRPANSFGD
501: AYRLLTPSVK VQLLIYFMLK YAMEILLSES SVVTSYYFGW TTSSVAIFLA CLGLTVLPIN ILVGSYISNM FEDRQILLTS EIIVFVGILF SFNLFVPYTV
601: PQYVISGLVM FVAAEVLEGV NLSLLSRVMS SRLSKGTYNG GLLSTEAGTL ARVVADVTIT LGGYLGRNHL LNATLLPSLV ICIGSIVATC CTYNSLY

Best Arabidopsis Sequence Match ( AT1G63010.6 )
(BLAST)

001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.