CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45970	Canola	mitochondrion	97.69	97.27
CDY64893	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	96.11	95.01
CDY66560	Canola	cytosol, mitochondrion, nucleus, peroxisome	95.82	94.73
AT1G63010.5	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	92.36	90.54
CDX93857	Canola	endoplasmic reticulum, extracellular	12.25	90.43
CDX71233	Canola	nucleus	16.71	84.06
CDX86744	Canola	cytosol, peroxisome, plasma membrane	77.67	76.56
CDY10843	Canola	mitochondrion	76.66	76.55
VIT_02s0025g04540.t01	Wine grape	extracellular	76.8	76.36
CDY13281	Canola	cytosol, peroxisome, plasma membrane	77.23	76.14
CDY41259	Canola	mitochondrion	76.51	75.86
KRH38329	Soybean	cytosol, peroxisome, plasma membrane	75.22	75.11
KRH08812	Soybean	cytosol, peroxisome, plasma membrane	74.93	74.82
KRG91596	Soybean	mitochondrion	75.07	74.75
KRH35227	Soybean	plasma membrane	74.64	74.32
CDX73315	Canola	mitochondrion	12.82	68.46
CDY28410	Canola	golgi, nucleus, plasma membrane	45.53	64.23
CDY41366	Canola	extracellular, golgi	12.54	54.72

Protein Annotations

MapMan:24.2.2.2.3	GO:A0A078I3P9	UniProt:A0A078I3P9	EnsemblPlants:CDY45470	ProteinID:CDY45470	ProteinID:CDY45470.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00082097001	InterPro:IPR004331	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF03105	PFAM:PF07690	PFscan:PS51382	PANTHER:PTHR23510	PANTHER:PTHR23510:SF55	InterPro:SPX_dom
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EAD03B	SEG:seg	:	:

Description

BnaC09g12880DBnaC09g12880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3P9]

Coordinates

chrLK032626:+:55099..58012

Molecular Weight (calculated)

77808.6 Da

IEP (calculated)

7.183

GRAVY (calculated)

0.175

Length

694 amino acids

Sequence
(BLAST)

001: MVAFGKYLQR KQIEEWRGYY INYKLMKQRV KQYAEQIRGG SQHPRHVLKD FSRMLDTQIE KTVLFMLEQQ GLLAGRLSTL RETHDAVLEQ PDISKIVELR
101: ESYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPLQDPV
201: VEAIKTAVDK LTNSTSFLNF LAQHALIMQD DLQTPSEDTI DERTYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSITL LLVGRLCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKLTFNQST LPGWVMAVAW LFYLVWLCIS FKEPLRDTEE QERSKRNETS SMTERIEEGI RKPLLITSGI LPDDEEDCDE SEESADDSRR PANSFGDAYR
501: LLTPSVKVQL LIYFMLKYAM EILLSESSVV TSYYFGWTTS SVAIFLACLG LTVLPINILV GSYISNMFED RQILLTSEII VFVGILFSFN LFVPYTVPQY
601: VISGLVMFVA AEVLEGVNLS LLSRVMSSRL SKGTYNGGLL STEAGTLARV VADVTITLGG YLGRNHLLNA TLLPSLVICI GSIVATCCTY NSLY

Best Arabidopsis Sequence Match ( AT1G63010.6 )
(BLAST)

001: MVAFGKYLQR KQIEEWSGYY INYKLMKKKV KQYAEQIQGG SQHPRHVLKD FSRMLDTQIE TTVLFMLEQQ GLLSGRLAKL RESHDAILEQ PDISRIFELR
101: EAYRDVGRDL LQLLKFVELN AIGLRKILKK FDKRFGYRFA DYYVKTRANH PYSQLQQVFK HVGVGAVVGA ISRNLHELQE NEGSFYSIYD QPVLPAQDPV
201: VEAINNAVDK LTFSTNFLNF LAQHALIMQD DLVTPSEDTI DERSYHFNSL LLNLGNTFLY MVNTYIIVPT ADDYSMSLGA AATVCGVVIG SMAVAQVFSS
301: VYFSAWSNKS YFKPLVFSSI ALFIGNLMYA LAYDANSIAL LLLGRVCCGL GSARAVNRRY ISDCVPLRIR MQASAGFVSA SALGMACGPA LAGLLQIKFK
401: FYKFTFNQST LPGWVMAVAW LFYLVWLCIS FREPLRDTED GEKNNRNETT SATDRVESSR VEEGLRLPLL ITSGIKPEDE EECDESEESP EDSHKPANSF
501: IEAYRLLTPS VKVQLLIYFM LKYSMEILLS ESSVITSYYF SWTTSSVAIF LACLGLTVLP INILVGSYIS NMFEDRQILL TSEIIVFLGI LFSFNLFVPY
601: TVPQYVISGL IMFVAAEVLE GVNLSLLSRV MSSRLSKGTY NGGLLSTEAG TLARVVADAT ITLGGYLGRG HLLNATLLPS LVICIGSIVA TCCTYNSLY

Arabidopsis Description

Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I0G7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.