Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35924 | Soybean | nucleus | 93.24 | 92.58 |
| VIT_01s0011g03780.t01 | Wine grape | nucleus | 54.09 | 68.78 |
| AT1G68360.1 | Thale cress | nucleus | 44.84 | 51.64 |
| CDX96028 | Canola | nucleus | 41.99 | 50.0 |
| CDX81505 | Canola | nucleus | 40.93 | 49.57 |
| CDY67985 | Canola | nucleus | 41.28 | 49.36 |
| Bra004300.1-P | Field mustard | nucleus | 41.28 | 49.15 |
| CDY01910 | Canola | nucleus | 41.28 | 48.74 |
| Bra033944.1-P | Field mustard | nucleus | 39.5 | 47.84 |
| KRH01734 | Soybean | nucleus | 26.69 | 41.9 |
| KRH46944 | Soybean | nucleus | 25.27 | 41.28 |
| KRH68238 | Soybean | nucleus | 18.15 | 30.72 |
| KRH37026 | Soybean | nucleus | 13.88 | 26.9 |
| KRG96499 | Soybean | nucleus | 18.15 | 26.29 |
| KRH11994 | Soybean | nucleus | 16.73 | 25.41 |
| KRH74690 | Soybean | nucleus | 20.64 | 24.07 |
| KRH69467 | Soybean | nucleus | 21.0 | 23.98 |
| KRG95435 | Soybean | nucleus | 19.57 | 21.57 |
| KRH67106 | Soybean | nucleus | 18.86 | 20.46 |
| KRH38054 | Soybean | nucleus | 19.57 | 17.92 |
Protein Annotations
| EntrezGene:102663095 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02012648 | EnsemblPlantsGene:GLYMA_20G117800 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR013087 | UniProt:K7N2X8 | EnsemblPlants:KRG90856 | ProteinID:KRG90856 | ProteinID:KRG90856.1 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF237 | SUPFAM:SSF57667 | UniParc:UPI00023DCE49 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:36050993..36052045
Molecular Weight (calculated)
29385.1 Da
IEP (calculated)
7.395
GRAVY (calculated)
-0.391
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: METTQLDYNT KRANPTSPTR LKLFGFSVHH EDIMEEDEVV VAHDDVADST TKATSTSPSP SDSPDSSVAA AGPPSSGDRK YECQYCCREF ANSQALGGHQ
101: NAHKKERQQL KRAQLQASRN AAVSFVRNPM ISAFAPPPHL LAPPGSVMVS AAPPSWVYMP PRAAPPPFHV SVSHGCAFPS AHGNNNGFSG GSSSNSNNVT
201: ITTGVKSAGA GMFPYVGVVG DSSLAALSTV QVQARAHHAR IDGPSLSRFS KGDGGPKFDD AWGLDLHLSL APAAPPSLGS A
101: NAHKKERQQL KRAQLQASRN AAVSFVRNPM ISAFAPPPHL LAPPGSVMVS AAPPSWVYMP PRAAPPPFHV SVSHGCAFPS AHGNNNGFSG GSSSNSNNVT
201: ITTGVKSAGA GMFPYVGVVG DSSLAALSTV QVQARAHHAR IDGPSLSRFS KGDGGPKFDD AWGLDLHLSL APAAPPSLGS A
001: MEELDFSSKT TTSRLKLFGF SVDGEEDFSD QSVKTNLSSV SPERGEFPAG SSGRSGGGVR SRGGGGGGGE RKYECQYCCR EFGNSQALGG HQNAHKKERQ
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
Arabidopsis Description
GIS3Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.