Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68238 | Soybean | nucleus | 68.04 | 79.52 |
| Solyc01g060420.2.1 | Tomato | nucleus | 25.26 | 31.82 |
| VIT_05s0077g01390.t01 | Wine grape | nucleus | 33.51 | 31.4 |
| PGSC0003DMT400038786 | Potato | cytosol, mitochondrion, nucleus | 20.62 | 31.25 |
| KRH46944 | Soybean | nucleus | 23.2 | 26.16 |
| KRH37026 | Soybean | nucleus | 19.07 | 25.52 |
| KRH01734 | Soybean | nucleus | 23.2 | 25.14 |
| KRH11994 | Soybean | nucleus | 22.16 | 23.24 |
| KRG90856 | Soybean | nucleus | 26.29 | 18.15 |
| KRH35924 | Soybean | nucleus | 26.29 | 18.02 |
| KRH74690 | Soybean | nucleus | 21.65 | 17.43 |
| KRH69467 | Soybean | nucleus | 21.13 | 16.67 |
| KRG95435 | Soybean | nucleus | 20.62 | 15.69 |
| KRH67106 | Soybean | nucleus | 20.62 | 15.44 |
| KRH38054 | Soybean | nucleus | 24.23 | 15.31 |
Protein Annotations
| EntrezGene:100806818 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02012155 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G214600 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1NBA6 | InterPro:IPR013087 | EnsemblPlants:KRG96499 | ProteinID:KRG96499 | ProteinID:KRG96499.1 |
| PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | SUPFAM:SSF57667 |
| UniParc:UPI0001BA8B1D | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:46778664..46780640
Molecular Weight (calculated)
21924.9 Da
IEP (calculated)
10.732
GRAVY (calculated)
-0.653
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNHHHVVQT SPPKLFGFPL TEQEELNSDA ERKYEVGEDR KFRCHYCKRV FGNSQALGGH QNAHKKERQR ARRFQIHTHR RSIAAPSSAS VLNSHAIIRS
101: VPSVTVTTLP SSIYLRGGPP TTSSLLPIFH PRQPNNTKHF PSRPILIPSS TYHRTNCTPS FPFQLYASPS VLQSAPNVRD FSAESREVDV HLKL
101: VPSVTVTTLP SSIYLRGGPP TTSSLLPIFH PRQPNNTKHF PSRPILIPSS TYHRTNCTPS FPFQLYASPS VLQSAPNVRD FSAESREVDV HLKL
001: MKTYDFMNVN SFSPKERPIR LFGFEFGASH EESESKDNYN ENNESIKDDN KEKRFKCHYC FRNFPTSQAL GGHQNAHKRE RQQTKRFNLH SNAAAFFHRQ
101: QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L
101: QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L
Arabidopsis Description
GIS2Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.