Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11994 | Soybean | nucleus | 70.34 | 55.14 |
| KRH68238 | Soybean | nucleus | 22.76 | 19.88 |
| KRG96499 | Soybean | nucleus | 25.52 | 19.07 |
| KRH01734 | Soybean | nucleus | 22.76 | 18.44 |
| KRH46944 | Soybean | nucleus | 21.38 | 18.02 |
| KRH69467 | Soybean | nucleus | 24.14 | 14.23 |
| KRH74690 | Soybean | nucleus | 23.45 | 14.11 |
| KRG90856 | Soybean | nucleus | 26.9 | 13.88 |
| KRH35924 | Soybean | nucleus | 26.9 | 13.78 |
| KRG95435 | Soybean | nucleus | 24.14 | 13.73 |
| KRH67106 | Soybean | nucleus | 22.76 | 12.74 |
| KRH38054 | Soybean | nucleus | 25.52 | 12.05 |
Protein Annotations
| EMBL:ACUP02005408 | EnsemblPlants:KRH37026 | EnsemblPlantsGene:GLYMA_09G039200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | PFscan:PS50157 |
| ProteinID:KRH37026 | ProteinID:KRH37026.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0006EDFFC0 |
| UniProt:A0A0R0I7D4 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:3281836..3282273
Molecular Weight (calculated)
16004.8 Da
IEP (calculated)
10.633
GRAVY (calculated)
-0.780
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MPATSTNIPY NTTYKSRFTC YFCYREFANS QALGGHQNAH KKERKIAALS SFGYYHHHPR FIAPSPLIVV PHGGSSSSSS GPLVRPRGGP RHNHPPMGAS
101: MGEQQNNNNI VVDDADGDVD LNLSLAHSTT TSKFRGKKIP KRRRT
101: MGEQQNNNNI VVDDADGDVD LNLSLAHSTT TSKFRGKKIP KRRRT
001: MDEATGETET QDFMNVESFS QLPFIRRPKD KNPKPIRVFG KDFTGRDFSI TTGQEDYTDP YQTKNKEEEE EEDQTGDNST DNNSISHNRR FECHYCFRNF
101: PTSQALGGHQ NAHKRERQLA KRGVSSYFYH PDNNPYSYRH YPSWTNGPLT AARSYGGFSS GPKPSGYYTR PSYGSQLGLW RLPPRVQGVY NSNAAFTSNG
201: SSSSSNSTLP LLTRSQTQLS SQVGGSAAQN RMSSYGYGLS PNVQDHVSLD LHL
101: PTSQALGGHQ NAHKRERQLA KRGVSSYFYH PDNNPYSYRH YPSWTNGPLT AARSYGGFSS GPKPSGYYTR PSYGSQLGLW RLPPRVQGVY NSNAAFTSNG
201: SSSSSNSTLP LLTRSQTQLS SQVGGSAAQN RMSSYGYGLS PNVQDHVSLD LHL
Arabidopsis Description
GISGIS [Source:UniProtKB/TrEMBL;Acc:A0A178V7D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.