Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90856 | Soybean | nucleus | 92.58 | 93.24 |
| VIT_01s0011g03780.t01 | Wine grape | nucleus | 53.71 | 68.78 |
| AT1G68360.1 | Thale cress | nucleus | 44.17 | 51.23 |
| CDX96028 | Canola | nucleus | 41.7 | 50.0 |
| Bra004300.1-P | Field mustard | nucleus | 40.99 | 49.15 |
| CDY01910 | Canola | nucleus | 40.99 | 48.74 |
| CDX81505 | Canola | nucleus | 39.93 | 48.71 |
| CDY67985 | Canola | nucleus | 40.28 | 48.51 |
| Bra033944.1-P | Field mustard | nucleus | 38.52 | 46.98 |
| KRH01734 | Soybean | nucleus | 26.15 | 41.34 |
| KRH46944 | Soybean | nucleus | 24.73 | 40.7 |
| KRH68238 | Soybean | nucleus | 18.02 | 30.72 |
| KRH37026 | Soybean | nucleus | 13.78 | 26.9 |
| KRG96499 | Soybean | nucleus | 18.02 | 26.29 |
| KRH11994 | Soybean | nucleus | 16.61 | 25.41 |
| KRH74690 | Soybean | nucleus | 20.49 | 24.07 |
| KRH69467 | Soybean | nucleus | 20.85 | 23.98 |
| KRG95435 | Soybean | nucleus | 18.37 | 20.39 |
| KRH67106 | Soybean | nucleus | 18.02 | 19.69 |
| KRH38054 | Soybean | nucleus | 19.08 | 17.59 |
Protein Annotations
| EntrezGene:100811796 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02006706 | EnsemblPlantsGene:GLYMA_10G272300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1LEU7 | InterPro:IPR013087 | EnsemblPlants:KRH35924 | ProteinID:KRH35924 | ProteinID:KRH35924.1 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF237 | SUPFAM:SSF57667 | UniParc:UPI000233D0E8 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:49452029..49453400
Molecular Weight (calculated)
29661.2 Da
IEP (calculated)
7.395
GRAVY (calculated)
-0.443
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: METTQLDYNT KKTNPTSPTR LKLFGFSVHH EDIMDEDEVA HDDVADSTTK VTSSTSPSSP SDSPDSSVAG AGPPSSADRK YECQYCCREF ANSQALGGHQ
101: NAHKKERQQL KRAQLQASRN AAVSFVRNPM ISAFAPPPHL LAPPGTVVVP AAPPSWVYVP PRAAPPPFHV SVSHGCAFPS AHGNSNNNGF SSSSSNNSNN
201: VTITTGVKSA GAGMFPYVGV VGDSSSLALS TVQVQARAHH ARIDGPSLSR FSKGDSGPKF DDAWGLDLHL SLAPAAPSSL GSA
101: NAHKKERQQL KRAQLQASRN AAVSFVRNPM ISAFAPPPHL LAPPGTVVVP AAPPSWVYVP PRAAPPPFHV SVSHGCAFPS AHGNSNNNGF SSSSSNNSNN
201: VTITTGVKSA GAGMFPYVGV VGDSSSLALS TVQVQARAHH ARIDGPSLSR FSKGDSGPKF DDAWGLDLHL SLAPAAPSSL GSA
001: MEELDFSSKT TTSRLKLFGF SVDGEEDFSD QSVKTNLSSV SPERGEFPAG SSGRSGGGVR SRGGGGGGGE RKYECQYCCR EFGNSQALGG HQNAHKKERQ
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
Arabidopsis Description
GIS3Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.