Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81505 | Canola | nucleus | 81.56 | 85.78 |
| CDX96028 | Canola | nucleus | 82.38 | 85.17 |
| CDY01910 | Canola | nucleus | 82.79 | 84.87 |
| CDY67985 | Canola | nucleus | 81.56 | 84.68 |
| Bra004300.1-P | Field mustard | nucleus | 81.56 | 84.32 |
| Bra033944.1-P | Field mustard | nucleus | 79.92 | 84.05 |
| PGSC0003DMT400037720 | Potato | nucleus | 49.18 | 55.81 |
| VIT_01s0011g03780.t01 | Wine grape | nucleus | 50.41 | 55.66 |
| Solyc05g009170.1.1 | Tomato | nucleus | 47.95 | 55.19 |
| PGSC0003DMT400037771 | Potato | nucleus | 47.54 | 54.72 |
| Solyc05g009180.1.1 | Tomato | nucleus | 47.95 | 54.42 |
| KRG90856 | Soybean | nucleus | 51.64 | 44.84 |
| KRH35924 | Soybean | nucleus | 51.23 | 44.17 |
| AT1G67030.1 | Thale cress | nucleus | 34.84 | 43.15 |
| AT1G10480.1 | Thale cress | nucleus | 20.08 | 23.22 |
| AT5G06650.1 | Thale cress | nucleus | 16.39 | 20.94 |
| AT3G58070.1 | Thale cress | nucleus | 20.49 | 19.76 |
| AT2G41940.1 | Thale cress | nucleus | 20.49 | 19.46 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:843165 | UniProt:A0A178W8G6 | ProteinID:AAG52593.1 | EMBL:AB493526 |
| ProteinID:AEE34785.1 | ArrayExpress:AT1G68360 | EnsemblPlantsGene:AT1G68360 | RefSeq:AT1G68360 | TAIR:AT1G68360 | RefSeq:AT1G68360-TAIR-G |
| EnsemblPlants:AT1G68360.1 | TAIR:AT1G68360.1 | EMBL:BT029451 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 |
| GO:GO:0009736 | GO:GO:0009740 | GO:GO:0009987 | GO:GO:0010090 | GO:GO:0016043 | GO:GO:0019748 |
| GO:GO:0019760 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR013087 |
| RefSeq:NP_177003.1 | ProteinID:OAP13372.1 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 |
| PO:PO:0025022 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF237 | UniProt:Q9C9H1 |
| SUPFAM:SSF57667 | UniParc:UPI00000A50C3 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
GIS3Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1]
Coordinates
chr1:-:25621533..25622593
Molecular Weight (calculated)
25601.7 Da
IEP (calculated)
8.349
GRAVY (calculated)
-0.533
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELDFSSKT TTSRLKLFGF SVDGEEDFSD QSVKTNLSSV SPERGEFPAG SSGRSGGGVR SRGGGGGGGE RKYECQYCCR EFGNSQALGG HQNAHKKERQ
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.