Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016900.1-P | Field mustard | nucleus | 80.93 | 81.89 |
| CDY14805 | Canola | nucleus | 81.32 | 81.64 |
| CDY06892 | Canola | nucleus | 80.16 | 81.1 |
| Bra004660.1-P | Field mustard | nucleus | 78.21 | 80.4 |
| CDX79901 | Canola | nucleus | 78.21 | 80.4 |
| CDY35394 | Canola | nucleus | 72.76 | 75.4 |
| Bra000245.1-P | Field mustard | nucleus | 72.76 | 75.4 |
| CDY22545 | Canola | nucleus | 73.15 | 74.9 |
| CDY64571 | Canola | nucleus | 75.49 | 61.59 |
| AT3G58070.1 | Thale cress | nucleus | 47.86 | 48.62 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 42.8 | 46.22 |
| PGSC0003DMT400013992 | Potato | nucleus | 39.69 | 44.16 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 18.68 | 44.04 |
| KRH67106 | Soybean | nucleus | 42.41 | 42.08 |
| KRG95435 | Soybean | nucleus | 41.63 | 41.96 |
| Solyc03g058160.2.1 | Tomato | nucleus | 35.41 | 41.36 |
| AT5G06650.1 | Thale cress | nucleus | 26.07 | 35.08 |
| KRH38054 | Soybean | nucleus | 41.63 | 34.85 |
| GSMUA_Achr10P... | Banana | nucleus | 35.41 | 33.46 |
| Os02t0775600-01 | Rice | nucleus | 35.8 | 32.97 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 21.4 | 31.79 |
| Zm00001d018247_P001 | Maize | nucleus | 34.24 | 30.99 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 33.07 | 30.8 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 33.46 | 30.18 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 33.07 | 30.14 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 33.46 | 30.07 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 33.07 | 29.93 |
| Zm00001d044980_P001 | Maize | nucleus | 28.79 | 29.84 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 27.63 | 29.58 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 27.63 | 29.46 |
| Zm00001d052118_P001 | Maize | nucleus | 35.02 | 29.41 |
| EES07621 | Sorghum | nucleus | 35.02 | 29.22 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 27.24 | 29.17 |
| Zm00001d037136_P001 | Maize | nucleus | 29.18 | 28.2 |
| OQU76029 | Sorghum | plastid | 30.74 | 26.96 |
| AT1G67030.1 | Thale cress | nucleus | 16.73 | 21.83 |
| AT1G68360.1 | Thale cress | nucleus | 19.46 | 20.49 |
| HORVU7Hr1G034940.1 | Barley | plastid | 9.73 | 20.0 |
| AT1G10480.1 | Thale cress | nucleus | 15.95 | 19.43 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:818794 | ProteinID:AAB63548.1 | ProteinID:AEC10051.1 | ArrayExpress:AT2G41940 | EnsemblPlantsGene:AT2G41940 |
| RefSeq:AT2G41940 | TAIR:AT2G41940 | RefSeq:AT2G41940-TAIR-G | EnsemblPlants:AT2G41940.1 | TAIR:AT2G41940.1 | EMBL:AY039597 |
| EMBL:AY056093 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009738 | GO:GO:0009740 |
| GO:GO:0009788 | GO:GO:0009987 | GO:GO:0010026 | GO:GO:0030154 | GO:GO:0044212 | GO:GO:0046872 |
| InterPro:IPR013087 | EMBL:L39651 | RefSeq:NP_181725.1 | UniProt:P93751 | PFAM:PF13912 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | SUPFAM:SSF57667 | UniParc:UPI00000A4158 | Symbol:ZFP8 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
Coordinates
chr2:+:17507343..17508616
Molecular Weight (calculated)
29572.8 Da
IEP (calculated)
8.302
GRAVY (calculated)
-1.301
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.