Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004660.1-P | Field mustard | nucleus | 98.0 | 98.0 |
| CDY06892 | Canola | nucleus | 87.6 | 86.22 |
| CDY14805 | Canola | nucleus | 86.8 | 84.77 |
| CDY35394 | Canola | nucleus | 82.0 | 82.66 |
| CDY22545 | Canola | nucleus | 80.8 | 80.48 |
| AT2G41940.1 | Thale cress | nucleus | 80.4 | 78.21 |
| CDY64571 | Canola | nucleus | 94.4 | 74.92 |
| CDY57240 | Canola | nucleus | 48.8 | 51.05 |
| CDX71975 | Canola | nucleus | 50.0 | 49.6 |
| CDY06054 | Canola | nucleus | 49.6 | 49.01 |
| CDY56241 | Canola | nucleus | 41.6 | 46.43 |
| PGSC0003DMT400013992 | Potato | nucleus | 41.6 | 45.02 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 42.8 | 44.96 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 18.8 | 43.12 |
| Solyc03g058160.2.1 | Tomato | nucleus | 37.2 | 42.27 |
| KRG95435 | Soybean | nucleus | 42.0 | 41.18 |
| KRH67106 | Soybean | nucleus | 42.4 | 40.93 |
| CDY04997 | Canola | nucleus | 27.2 | 37.99 |
| CDY14074 | Canola | nucleus | 26.8 | 37.22 |
| KRH38054 | Soybean | nucleus | 43.2 | 35.18 |
| GSMUA_Achr10P... | Banana | nucleus | 37.2 | 34.19 |
| Zm00001d018247_P001 | Maize | nucleus | 37.2 | 32.75 |
| Os02t0775600-01 | Rice | nucleus | 36.4 | 32.62 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 35.6 | 32.25 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 22.0 | 31.79 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 35.6 | 31.23 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 35.2 | 31.21 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 35.6 | 31.12 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 35.2 | 30.99 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 28.8 | 30.0 |
| EES07621 | Sorghum | nucleus | 36.8 | 29.87 |
| Zm00001d052118_P001 | Maize | nucleus | 36.4 | 29.74 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 28.4 | 29.58 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 28.4 | 29.46 |
| Zm00001d044980_P001 | Maize | nucleus | 28.8 | 29.03 |
| Zm00001d037136_P001 | Maize | nucleus | 29.6 | 27.82 |
| OQU76029 | Sorghum | plastid | 30.8 | 26.28 |
| CDX96114 | Canola | nucleus | 17.2 | 22.51 |
| CDY01779 | Canola | nucleus | 17.2 | 21.94 |
| CDX96028 | Canola | nucleus | 20.4 | 21.61 |
| CDY01910 | Canola | nucleus | 20.4 | 21.43 |
| CDX81505 | Canola | nucleus | 19.6 | 21.12 |
| CDY67985 | Canola | nucleus | 19.6 | 20.85 |
| HORVU7Hr1G034940.1 | Barley | plastid | 10.4 | 20.8 |
| CDY20629 | Canola | nucleus | 16.4 | 19.9 |
| CDY20951 | Canola | nucleus | 16.0 | 19.51 |
| CDY34889 | Canola | nucleus | 15.6 | 19.31 |
| CDY67406 | Canola | nucleus | 15.6 | 18.93 |
Protein Annotations
| EnsemblPlants:CDX79901 | EnsemblPlantsGene:GSBRNA2T00132754001 | GO:A0A078CRX3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX79901 | ProteinID:CDX79901.1 | ScanProsite:PS00028 | SEG:seg |
| SUPFAM:SSF57667 | UniParc:UPI0004EEE947 | MapMan:15.5.15 | : | : | : |
Description
BnaA05g02550D
Coordinates
chrLK031819:-:759572..760510
Molecular Weight (calculated)
28397.7 Da
IEP (calculated)
8.292
GRAVY (calculated)
-1.040
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKGSIIR LFGQELVGDN SSGTAQQEED ILETTTTKIN DDSSENVKDK EKEKDSSNNR RFECHYCFRN
101: FPTSQALGGH QNAHKRERQH AKRGSMPSYL HQSGSHHVYG FLNNHHHRHY PSWTTEARFY GGGGGVAQQT PSYYSRTLLP PPSSSNTPTI NGSPLGLWRV
201: PPSTSANAIH SVYSASPAFR THDQESKETH WPYKLMKPNV QDHVSLDLHL
101: FPTSQALGGH QNAHKRERQH AKRGSMPSYL HQSGSHHVYG FLNNHHHRHY PSWTTEARFY GGGGGVAQQT PSYYSRTLLP PPSSSNTPTI NGSPLGLWRV
201: PPSTSANAIH SVYSASPAFR THDQESKETH WPYKLMKPNV QDHVSLDLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.