Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031715.1-P | Field mustard | nucleus | 98.06 | 99.02 |
| CDY34889 | Canola | nucleus | 94.66 | 96.53 |
| CDY20629 | Canola | nucleus | 85.92 | 85.92 |
| CDY20951 | Canola | nucleus | 82.52 | 82.93 |
| AT1G10480.1 | Thale cress | nucleus | 82.52 | 80.57 |
| VIT_01s0026g00850.t01 | Wine grape | nucleus | 40.78 | 34.01 |
| PGSC0003DMT400040327 | Potato | nucleus | 37.38 | 31.05 |
| KRH74690 | Soybean | nucleus | 35.92 | 30.71 |
| KRH69467 | Soybean | nucleus | 36.41 | 30.49 |
| Solyc05g006310.1.1 | Tomato | nucleus | 36.89 | 30.4 |
| VIT_14s0066g01860.t01 | Wine grape | nucleus | 30.58 | 26.25 |
| CDX96114 | Canola | nucleus | 20.87 | 22.51 |
| CDY01779 | Canola | nucleus | 20.39 | 21.43 |
| CDX81505 | Canola | nucleus | 23.79 | 21.12 |
| CDY67985 | Canola | nucleus | 23.79 | 20.85 |
| CDY04997 | Canola | nucleus | 17.96 | 20.67 |
| CDY14074 | Canola | nucleus | 17.96 | 20.56 |
| CDX96028 | Canola | nucleus | 23.3 | 20.34 |
| CDY01910 | Canola | nucleus | 22.82 | 19.75 |
| CDY56241 | Canola | nucleus | 18.93 | 17.41 |
| CDY57240 | Canola | nucleus | 19.42 | 16.74 |
| CDY14805 | Canola | nucleus | 19.9 | 16.02 |
| CDY06892 | Canola | nucleus | 19.42 | 15.75 |
| CDY35394 | Canola | nucleus | 18.93 | 15.73 |
| CDX79901 | Canola | nucleus | 18.93 | 15.6 |
| CDY06054 | Canola | nucleus | 18.93 | 15.41 |
| CDY22545 | Canola | nucleus | 18.45 | 15.14 |
| CDX71975 | Canola | nucleus | 18.45 | 15.08 |
| CDY64571 | Canola | nucleus | 17.48 | 11.43 |
Protein Annotations
| EnsemblPlants:CDY67406 | EnsemblPlantsGene:GSBRNA2T00062908001 | Gene3D:3.30.160.60 | GO:A0A078JNW4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF252 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY67406 | ProteinID:CDY67406.1 | ScanProsite:PS00028 | SEG:seg |
| SUPFAM:SSF57667 | UniParc:UPI0004EDC189 | UniProt:A0A078JNW4 | MapMan:15.5.15 | : | : |
Description
BnaCnng54780DBnaCnng54780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNW4]
Coordinates
chrLK036067:+:1974..3060
Molecular Weight (calculated)
23097.1 Da
IEP (calculated)
9.845
GRAVY (calculated)
-0.796
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRTCESSSG SSSDKTLKLF GFELISGNRS QEVTTTDSVS SSTNNTAPFK AKRLECQYCG KEFANSQALG GHQNAHKKER LKKKRLQLQA RRASIGYYLT
101: THQQPITKSF QRQCKTPSYC AFSSMHVNSQ IGVFNEEWAS MSSQISFGNK DTCQDLNEQN GEMGKMYGVR QNMIQFQRAR DLTSRSDSKR SIQSLDLHLG
201: FAGDMA
101: THQQPITKSF QRQCKTPSYC AFSSMHVNSQ IGVFNEEWAS MSSQISFGNK DTCQDLNEQN GEMGKMYGVR QNMIQFQRAR DLTSRSDSKR SIQSLDLHLG
201: FAGDMA
001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
Arabidopsis Description
ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.