Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000245.1-P | Field mustard | nucleus | 91.63 | 92.74 |
| CDY35394 | Canola | nucleus | 91.63 | 92.74 |
| CDX79901 | Canola | nucleus | 80.48 | 80.8 |
| CDY06892 | Canola | nucleus | 77.69 | 76.77 |
| CDY14805 | Canola | nucleus | 77.69 | 76.17 |
| AT2G41940.1 | Thale cress | nucleus | 74.9 | 73.15 |
| CDY64571 | Canola | nucleus | 77.69 | 61.9 |
| CDY57240 | Canola | nucleus | 47.01 | 49.37 |
| CDX71975 | Canola | nucleus | 48.21 | 48.02 |
| CDY06054 | Canola | nucleus | 47.81 | 47.43 |
| CDY56241 | Canola | nucleus | 41.43 | 46.43 |
| PGSC0003DMT400013992 | Potato | nucleus | 40.24 | 43.72 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 41.04 | 43.28 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 18.73 | 43.12 |
| Solyc03g058160.2.1 | Tomato | nucleus | 35.46 | 40.45 |
| KRG95435 | Soybean | nucleus | 40.64 | 40.0 |
| KRH67106 | Soybean | nucleus | 40.64 | 39.38 |
| CDY04997 | Canola | nucleus | 27.49 | 38.55 |
| CDY14074 | Canola | nucleus | 27.49 | 38.33 |
| KRH38054 | Soybean | nucleus | 42.23 | 34.53 |
| GSMUA_Achr10P... | Banana | nucleus | 37.05 | 34.19 |
| Os02t0775600-01 | Rice | nucleus | 36.26 | 32.62 |
| Zm00001d018247_P001 | Maize | nucleus | 36.26 | 32.04 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 35.06 | 31.88 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 35.46 | 31.23 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 35.06 | 31.21 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 34.66 | 30.63 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 34.66 | 30.42 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 29.08 | 30.42 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 29.08 | 30.29 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 20.72 | 30.06 |
| Zm00001d052118_P001 | Maize | nucleus | 36.26 | 29.74 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 28.29 | 29.58 |
| Zm00001d044980_P001 | Maize | nucleus | 29.08 | 29.44 |
| EES07621 | Sorghum | nucleus | 35.86 | 29.22 |
| Zm00001d037136_P001 | Maize | nucleus | 30.68 | 28.95 |
| OQU76029 | Sorghum | plastid | 30.68 | 26.28 |
| CDX96028 | Canola | nucleus | 22.31 | 23.73 |
| CDX96114 | Canola | nucleus | 17.93 | 23.56 |
| CDY01910 | Canola | nucleus | 22.31 | 23.53 |
| CDY01779 | Canola | nucleus | 17.93 | 22.96 |
| CDX81505 | Canola | nucleus | 21.12 | 22.84 |
| CDY67985 | Canola | nucleus | 21.12 | 22.55 |
| HORVU7Hr1G034940.1 | Barley | plastid | 10.76 | 21.6 |
| CDY20951 | Canola | nucleus | 15.94 | 19.51 |
| CDY20629 | Canola | nucleus | 15.94 | 19.42 |
| CDY34889 | Canola | nucleus | 15.14 | 18.81 |
| CDY67406 | Canola | nucleus | 15.14 | 18.45 |
Protein Annotations
| EnsemblPlants:CDY22545 | EnsemblPlantsGene:GSBRNA2T00019141001 | GO:A0A078G7X0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | PFscan:PS50157 |
| ProteinID:CDY22545 | ProteinID:CDY22545.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0004EE0C1B |
| UniProt:A0A078G7X0 | MapMan:15.5.15 | : | : | : | : |
Description
BnaC03g23550DBnaC03g23550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7X0]
Coordinates
chrLK032132:+:540380..541318
Molecular Weight (calculated)
28639.3 Da
IEP (calculated)
9.436
GRAVY (calculated)
-1.023
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETNGRRET HDFMNVNVES FSQLPFIRRT PPKDHKGSKI RLFGQELLKH NPQQEDFPAD SCEITTTKIK DESSSVNVKE KEKDKRNNRG FECHYCFRKF
101: PTSQALGGHQ NAHKRERQHA KRGSMTSYLN QHPEPHYVYG FLNNHHSLHY PSWTTEARFY GGGGGVQQTP SYYSGTLLPP PSSSIPPTIN GSPLGFWRGP
201: PSTSTDAIHG VYSASPALAF RSHDQETREP TWPYKLRKPN VKDHVSLDLH L
101: PTSQALGGHQ NAHKRERQHA KRGSMTSYLN QHPEPHYVYG FLNNHHSLHY PSWTTEARFY GGGGGVQQTP SYYSGTLLPP PSSSIPPTIN GSPLGFWRGP
201: PSTSTDAIHG VYSASPALAF RSHDQETREP TWPYKLRKPN VKDHVSLDLH L
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.