Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016900.1-P | Field mustard | nucleus | 99.21 | 99.21 |
| CDY14805 | Canola | nucleus | 94.88 | 94.14 |
| CDX79901 | Canola | nucleus | 86.22 | 87.6 |
| AT2G41940.1 | Thale cress | nucleus | 81.1 | 80.16 |
| CDY35394 | Canola | nucleus | 77.95 | 79.84 |
| CDY22545 | Canola | nucleus | 76.77 | 77.69 |
| CDY64571 | Canola | nucleus | 82.28 | 66.35 |
| CDY57240 | Canola | nucleus | 48.82 | 51.88 |
| CDX71975 | Canola | nucleus | 50.79 | 51.19 |
| CDY06054 | Canola | nucleus | 50.39 | 50.59 |
| CDY56241 | Canola | nucleus | 42.52 | 48.21 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 43.31 | 46.22 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 19.29 | 44.95 |
| PGSC0003DMT400013992 | Potato | nucleus | 40.55 | 44.59 |
| KRG95435 | Soybean | nucleus | 42.91 | 42.75 |
| KRH67106 | Soybean | nucleus | 42.52 | 41.7 |
| Solyc03g058160.2.1 | Tomato | nucleus | 35.83 | 41.36 |
| CDY04997 | Canola | nucleus | 27.17 | 38.55 |
| CDY14074 | Canola | nucleus | 26.77 | 37.78 |
| KRH38054 | Soybean | nucleus | 43.7 | 36.16 |
| GSMUA_Achr10P... | Banana | nucleus | 38.58 | 36.03 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 36.22 | 33.33 |
| Os02t0775600-01 | Rice | nucleus | 35.83 | 32.62 |
| Zm00001d018247_P001 | Maize | nucleus | 35.83 | 32.04 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 21.65 | 31.79 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 35.04 | 31.23 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 34.65 | 31.21 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 35.04 | 31.12 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 34.25 | 30.63 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 28.35 | 30.0 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 28.35 | 29.88 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 27.95 | 29.58 |
| Zm00001d044980_P001 | Maize | nucleus | 28.74 | 29.44 |
| Zm00001d052118_P001 | Maize | nucleus | 35.43 | 29.41 |
| EES07621 | Sorghum | nucleus | 35.43 | 29.22 |
| Zm00001d037136_P001 | Maize | nucleus | 29.13 | 27.82 |
| OQU76029 | Sorghum | plastid | 31.1 | 26.96 |
| CDX96114 | Canola | nucleus | 17.32 | 23.04 |
| CDY01779 | Canola | nucleus | 17.32 | 22.45 |
| CDX96028 | Canola | nucleus | 19.68 | 21.19 |
| CDX81505 | Canola | nucleus | 19.29 | 21.12 |
| CDY01910 | Canola | nucleus | 19.68 | 21.01 |
| CDY67985 | Canola | nucleus | 19.29 | 20.85 |
| HORVU7Hr1G034940.1 | Barley | plastid | 10.24 | 20.8 |
| CDY20629 | Canola | nucleus | 16.54 | 20.39 |
| CDY20951 | Canola | nucleus | 16.14 | 20.0 |
| CDY34889 | Canola | nucleus | 15.75 | 19.8 |
| CDY67406 | Canola | nucleus | 15.75 | 19.42 |
Protein Annotations
| MapMan:15.5.15 | GO:A0A078F173 | EnsemblPlants:CDY06892 | ProteinID:CDY06892 | ProteinID:CDY06892.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00123178001 | InterPro:IPR013087 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | SUPFAM:SSF57667 | UniParc:UPI0004EF4588 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
BnaA04g24230D
Coordinates
chrLK031974:-:43335..44317
Molecular Weight (calculated)
29181.5 Da
IEP (calculated)
7.594
GRAVY (calculated)
-1.120
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MDETNGQRET HDFMNVNVES FSQLPFIRRT PPKERSSIIR LFGQELVGDN SSDAQQEDFY VDSSETTTTK INEESSENVK DKDKDKEKDN SNNRRFECHY
101: CFRNFPTSQA LGGHQNAHKR ERQHAKRGSM PSYLHHADHH HVYGFLNNHH HRHYPTWTTE ARFYGGGVGG NQTPSYYSRT LLPPPSSSNP PMINGSPLGL
201: WRVPPPSTSA NAIHGVYSAS PAFQTHEQER KESKWPYRLM KPNVQDHVSL DLHL
101: CFRNFPTSQA LGGHQNAHKR ERQHAKRGSM PSYLHHADHH HVYGFLNNHH HRHYPTWTTE ARFYGGGVGG NQTPSYYSRT LLPPPSSSNP PMINGSPLGL
201: WRVPPPSTSA NAIHGVYSAS PAFQTHEQER KESKWPYRLM KPNVQDHVSL DLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.