Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000245.1-P | Field mustard | nucleus | 99.19 | 99.19 |
| CDY22545 | Canola | nucleus | 92.74 | 91.63 |
| CDX79901 | Canola | nucleus | 82.66 | 82.0 |
| CDY06892 | Canola | nucleus | 79.84 | 77.95 |
| CDY14805 | Canola | nucleus | 79.44 | 76.95 |
| AT2G41940.1 | Thale cress | nucleus | 75.4 | 72.76 |
| CDY64571 | Canola | nucleus | 80.24 | 63.17 |
| CDY57240 | Canola | nucleus | 47.98 | 49.79 |
| CDY56241 | Canola | nucleus | 42.74 | 47.32 |
| CDX71975 | Canola | nucleus | 47.98 | 47.22 |
| CDY06054 | Canola | nucleus | 47.58 | 46.64 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 19.35 | 44.04 |
| PGSC0003DMT400013992 | Potato | nucleus | 40.73 | 43.72 |
| VIT_08s0007g06870.t01 | Wine grape | nucleus | 41.94 | 43.7 |
| KRG95435 | Soybean | nucleus | 41.94 | 40.78 |
| KRH67106 | Soybean | nucleus | 42.34 | 40.54 |
| Solyc03g058160.2.1 | Tomato | nucleus | 35.89 | 40.45 |
| CDY04997 | Canola | nucleus | 28.23 | 39.11 |
| CDY14074 | Canola | nucleus | 28.23 | 38.89 |
| KRH38054 | Soybean | nucleus | 43.15 | 34.85 |
| GSMUA_Achr10P... | Banana | nucleus | 37.1 | 33.82 |
| Os02t0775600-01 | Rice | nucleus | 36.29 | 32.26 |
| Zm00001d018247_P001 | Maize | nucleus | 36.69 | 32.04 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 22.18 | 31.79 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 35.08 | 31.52 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 35.48 | 30.88 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 35.08 | 30.85 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 29.44 | 30.42 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 29.44 | 30.29 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 34.68 | 30.28 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 34.68 | 30.07 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 29.03 | 30.0 |
| Zm00001d044980_P001 | Maize | nucleus | 29.84 | 29.84 |
| Zm00001d052118_P001 | Maize | nucleus | 36.69 | 29.74 |
| EES07621 | Sorghum | nucleus | 36.29 | 29.22 |
| Zm00001d037136_P001 | Maize | nucleus | 30.65 | 28.57 |
| OQU76029 | Sorghum | plastid | 32.26 | 27.3 |
| CDX96114 | Canola | nucleus | 18.55 | 24.08 |
| CDY01779 | Canola | nucleus | 18.55 | 23.47 |
| CDX96028 | Canola | nucleus | 21.77 | 22.88 |
| CDY01910 | Canola | nucleus | 21.77 | 22.69 |
| CDX81505 | Canola | nucleus | 20.97 | 22.41 |
| CDY67985 | Canola | nucleus | 20.97 | 22.13 |
| HORVU7Hr1G034940.1 | Barley | plastid | 10.89 | 21.6 |
| CDY20951 | Canola | nucleus | 16.53 | 20.0 |
| CDY20629 | Canola | nucleus | 16.53 | 19.9 |
| CDY34889 | Canola | nucleus | 15.73 | 19.31 |
| CDY67406 | Canola | nucleus | 15.73 | 18.93 |
Protein Annotations
| EnsemblPlants:CDY35394 | EnsemblPlantsGene:GSBRNA2T00058378001 | Gene3D:3.30.160.60 | GO:A0A078HD77 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 |
| PFscan:PS50157 | ProteinID:CDY35394 | ProteinID:CDY35394.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 |
| UniParc:UPI0004EEADE3 | UniProt:A0A078HD77 | MapMan:15.5.15 | : | : | : |
Description
BnaA03g19660DBnaA03g19660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD77]
Coordinates
chrLK032351:-:126108..127036
Molecular Weight (calculated)
28263.9 Da
IEP (calculated)
9.016
GRAVY (calculated)
-1.009
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETNGGRET HDFMNVNVES FSQLPFIRRT PPKDHKGSKI RLFGQELLKD NPQHEDFSPD SCETITTRIK DEGSSENVKE KEKDKSKNRR FECHYCFRKF
101: PTSQALGGHQ NAHKRERQHA KRGSMTSYLN QHPEPHYVYG FLNNHHYPSW TTEARFYGGG GGVQQTPSYY SGTLLPPPSS SIPPTINGSP LGFWRVPPST
201: STNAIHGVYS ASPALAFRAH DQESREPTWP YKLMKPNVKD HVSLDLHL
101: PTSQALGGHQ NAHKRERQHA KRGSMTSYLN QHPEPHYVYG FLNNHHYPSW TTEARFYGGG GGVQQTPSYY SGTLLPPPSS SIPPTINGSP LGFWRVPPST
201: STNAIHGVYS ASPALAFRAH DQESREPTWP YKLMKPNVKD HVSLDLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.