Factsheet for GSMUA_Achr10P17690_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P02080_001	Banana	nucleus	63.6	62.68
VIT_08s0007g06870.t01	Wine grape	nucleus	39.71	45.38
GSMUA_Achr1P22000_001	Banana	nucleus	43.01	45.0
PGSC0003DMT400013992	Potato	nucleus	37.5	44.16
HORVU7Hr1G034930.2	Barley	nucleus	17.28	43.12
GSMUA_Achr8P22740_001	Banana	nucleus	39.34	42.13
GSMUA_Achr3P07800_001	Banana	nucleus	33.46	41.36
KRH67106	Soybean	nucleus	39.34	41.31
Solyc03g058160.2.1	Tomato	nucleus	32.72	40.45
KRG95435	Soybean	nucleus	37.87	40.39
Bra016900.1-P	Field mustard	nucleus	36.03	38.58
CDY06892	Canola	nucleus	36.03	38.58
CDY14805	Canola	nucleus	36.03	38.28
Bra003317.1-P	Field mustard	nucleus	33.09	38.14
CDY56241	Canola	nucleus	30.88	37.5
CDY57240	Canola	nucleus	32.72	37.24
CDX79901	Canola	nucleus	34.19	37.2
CDY35394	Canola	nucleus	33.82	37.1
CDY22545	Canola	nucleus	34.19	37.05
Zm00001d018247_P001	Maize	nucleus	38.6	36.97
Bra000245.1-P	Field mustard	nucleus	33.46	36.69
Bra004660.1-P	Field mustard	nucleus	33.46	36.4
GSMUA_AchrUn_...	Banana	cytosol	27.21	36.27
Os02t0775600-01	Rice	nucleus	37.13	36.2
PGSC0003DMT400060839	Potato	nucleus	31.25	35.71
CDX71975	Canola	nucleus	33.09	35.71
AT2G41940.1	Thale cress	nucleus	33.46	35.41
Solyc10g080600.1.1	Tomato	nucleus	30.15	35.04
CDY06054	Canola	nucleus	32.35	34.78
Bra007378.1-P	Field mustard	nucleus	32.35	34.78
Zm00001d052118_P001	Maize	nucleus	38.97	34.64
Solyc10g078990.1.1	Tomato	cytoskeleton, cytosol, nucleus	29.41	34.48
Solyc10g078970.1.1	Tomato	nucleus	25.74	34.15
OQU80598	Sorghum	mitochondrion, nucleus, plastid	21.69	34.1
AT3G58070.1	Thale cress	nucleus	31.25	33.6
KRH38054	Soybean	nucleus	37.87	33.55
EES07621	Sorghum	nucleus	37.87	33.44
TraesCS6D01G314600.1	Wheat	nucleus	34.93	33.33
TraesCS6B01G365700.1	Wheat	nucleus	34.93	33.22
HORVU6Hr1G080870.1	Barley	nucleus	34.56	33.1
TraesCS6A01G335100.1	Wheat	nucleus	34.19	32.98
PGSC0003DMT400029797	Potato	nucleus	31.25	32.95
Zm00001d044980_P001	Maize	nucleus	29.04	31.85
TraesCS7B01G071600.1	Wheat	nucleus	27.57	31.25
TraesCS7D01G167600.1	Wheat	nucleus	27.21	30.83
TraesCS7A01G167000.1	Wheat	nucleus	27.21	30.71
Zm00001d037136_P001	Maize	nucleus	29.04	29.7
OQU76029	Sorghum	plastid	31.99	29.69
CDY64571	Canola	nucleus	32.72	28.25
GSMUA_Achr8P18340_001	Banana	nucleus	21.32	25.22
GSMUA_Achr7P11950_001	Banana	nucleus	19.49	24.77
GSMUA_Achr3P21070_001	Banana	nucleus	19.85	23.18
GSMUA_Achr4P06770_001	Banana	nucleus	17.28	22.17
GSMUA_Achr8P31650_001	Banana	nucleus	15.44	21.11
GSMUA_Achr4P13760_001	Banana	nucleus	15.81	20.98
GSMUA_Achr2P14620_001	Banana	nucleus	16.54	20.55
GSMUA_Achr5P09990_001	Banana	cytosol, mitochondrion, nucleus	15.07	20.1
HORVU7Hr1G034940.1	Barley	plastid	9.19	20.0
GSMUA_Achr9P21420_001	Banana	nucleus	16.54	19.57
GSMUA_Achr2P07210_001	Banana	nucleus	15.81	17.7
GSMUA_Achr11P...	Banana	nucleus	16.54	17.65

Protein Annotations

EnsemblPlants:GSMUA_Achr10P17690_001	EnsemblPlants:GSMUA_Achr10T17690_001	EnsemblPlantsGene:GSMUA_Achr10G17690_001	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF226
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	UniParc:UPI0002954914
UniProt:M0RJ44	MapMan:15.5.15	:	:	:	:

Description

Putative ZOS3-05 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G17690_001]

Coordinates

chr10:+:24794633..24795451

Molecular Weight (calculated)

28937.6 Da

IEP (calculated)

7.355

GRAVY (calculated)

-0.506

Length

272 amino acids

Sequence
(BLAST)

001: MNERSEGRDF MSVDSFSQLP FIRPVPKPSS SSSSSTSGIR LFGIEVPHHP TNEEDNTEKD HTTTVNGGGE SARKFECHYC YRQFPTSQAL GGHQNAHKRE
101: RQHAKRVHIQ SAALAAIHHG PAAIDGHHLY GFFNYHQPFG PVLPAAAHFA VDSPSTPHYP ACHATSAASG SFGGCFYGGL GSAAQPINGS PLPGLWKAPG
201: VVHGSASVGL VHGDSPMPSP TTRRDQEPRI EGIGGIISDG NDRGASSASS KSQFAYQLMP GVKENVSLDL HL

Best Arabidopsis Sequence Match ( AT2G41940.1 )
(BLAST)

001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL

Arabidopsis Description

ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.