Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P22740_001 | Banana | nucleus | 64.09 | 55.51 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 23.18 | 46.79 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 41.36 | 35.0 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 42.27 | 33.7 |
| GSMUA_Achr10P... | Banana | nucleus | 41.36 | 33.46 |
| Zm00001d044980_P001 | Maize | nucleus | 35.45 | 31.45 |
| Os02t0775600-01 | Rice | nucleus | 38.64 | 30.47 |
| Zm00001d018247_P001 | Maize | nucleus | 39.09 | 30.28 |
| Bra028724.1-P | Field mustard | nucleus | 25.0 | 30.22 |
| CDY04997 | Canola | nucleus | 24.55 | 30.17 |
| CDY14074 | Canola | nucleus | 24.55 | 30.0 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 32.73 | 30.0 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 38.18 | 29.47 |
| Zm00001d037136_P001 | Maize | nucleus | 35.45 | 29.32 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 37.73 | 29.23 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 37.27 | 29.08 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 37.73 | 29.02 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 31.36 | 28.75 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 31.36 | 28.63 |
| EES07621 | Sorghum | nucleus | 40.0 | 28.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.36 | 28.43 |
| AT5G06650.1 | Thale cress | nucleus | 24.09 | 27.75 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 21.82 | 27.75 |
| Zm00001d052118_P001 | Maize | nucleus | 38.18 | 27.45 |
| OQU76029 | Sorghum | plastid | 35.45 | 26.62 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 20.91 | 21.5 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 20.45 | 21.23 |
| GSMUA_Achr5P09990_001 | Banana | cytosol, mitochondrion, nucleus | 19.09 | 20.59 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 20.91 | 20.0 |
| GSMUA_Achr4P13760_001 | Banana | nucleus | 18.64 | 20.0 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 17.73 | 19.6 |
| GSMUA_Achr9P21420_001 | Banana | nucleus | 20.45 | 19.57 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 19.09 | 19.18 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 20.45 | 18.52 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 19.09 | 18.03 |
| GSMUA_Achr11P... | Banana | nucleus | 17.73 | 15.29 |
| HORVU7Hr1G034940.1 | Barley | plastid | 8.64 | 15.2 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P07800_001 | EnsemblPlants:GSMUA_Achr3T07800_001 | EnsemblPlantsGene:GSMUA_Achr3G07800_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF226 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI000294BBB7 | UniProt:M0SCP7 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G07800_001]
Coordinates
chr3:-:5398591..5399382
Molecular Weight (calculated)
23842.8 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.647
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEQQIHNFM KVSVDSFSEL PFIRAVPAQQ NTPDTSPVIR LFGIDFAMEP DASQDGPSND PPSSTTETSN TPSAANADSG ESARKFECHY CCRKFPTSQA
101: LGGHQNAHKR ERQHAKRAHI HSALATQHTC PIMNPSACFH GSLGSTSQPI KSSTLPELWR MPVHDGKPSF HGDYPPAQPL FGGRDTKEMV VEGATTLVSP
201: KDQGGFDSGS KNGLSLDLRL
101: LGGHQNAHKR ERQHAKRAHI HSALATQHTC PIMNPSACFH GSLGSTSQPI KSSTLPELWR MPVHDGKPSF HGDYPPAQPL FGGRDTKEMV VEGATTLVSP
201: KDQGGFDSGS KNGLSLDLRL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.