Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P13760_001 | Banana | nucleus | 40.69 | 40.49 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 36.76 | 35.38 |
| GSMUA_Achr9P21420_001 | Banana | nucleus | 39.71 | 35.22 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 34.31 | 35.18 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 35.78 | 31.74 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 36.76 | 30.86 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 34.8 | 30.47 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 31.37 | 29.91 |
| Os01t0132766-01 | Rice | nucleus | 38.24 | 29.21 |
| TraesCS3A01G036000.1 | Wheat | nucleus | 36.76 | 29.18 |
| TraesCS3D01G044000.1 | Wheat | nucleus | 36.27 | 28.68 |
| TraesCS3B01G048000.1 | Wheat | nucleus | 36.27 | 28.57 |
| HORVU3Hr1G007060.1 | Barley | nucleus | 36.27 | 28.57 |
| Zm00001d039977_P001 | Maize | nucleus | 37.25 | 28.46 |
| Zm00001d008562_P001 | Maize | nucleus | 37.25 | 28.25 |
| EES02547 | Sorghum | nucleus | 39.22 | 28.17 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 28.43 | 26.48 |
| GSMUA_Achr11P... | Banana | nucleus | 32.35 | 25.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.53 | 23.53 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 25.49 | 20.0 |
| GSMUA_Achr8P22740_001 | Banana | nucleus | 24.02 | 19.29 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 20.59 | 19.09 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 20.59 | 15.22 |
| GSMUA_Achr10P... | Banana | nucleus | 20.1 | 15.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P09990_001 | EnsemblPlants:GSMUA_Achr5T09990_001 | EnsemblPlantsGene:GSMUA_Achr5G09990_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF237 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002969CEB | UniProt:M0SX78 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G09990_001]
Coordinates
chr5:-:7147537..7148151
Molecular Weight (calculated)
21792.1 Da
IEP (calculated)
7.163
GRAVY (calculated)
-0.551
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIECDDKS TNPRFKLFGF LVSDNDELLA PTAEATGDAA AGGGAADGRR YECQYCCREF ANSQALGGHQ NAHKKERQQL RRAQQLHRAS LHRSPLAAAN
101: VNYHRRAASP AFAPPRSSWV WYSLPSPPAS HSSLAARAIL PSSVPPPPPY YSTSAAYGLD GDGDLRWCSE SSRPINGTRL DGSTVAEGAT EDVDLHLSLA
201: PTGS
101: VNYHRRAASP AFAPPRSSWV WYSLPSPPAS HSSLAARAIL PSSVPPPPPY YSTSAAYGLD GDGDLRWCSE SSRPINGTRL DGSTVAEGAT EDVDLHLSLA
201: PTGS
001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
Arabidopsis Description
ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.