Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P22000_001 | Banana | nucleus | 42.16 | 33.08 |
| GSMUA_Achr8P22740_001 | Banana | nucleus | 37.25 | 29.92 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 37.25 | 27.54 |
| GSMUA_Achr10P... | Banana | nucleus | 36.27 | 27.21 |
| Os03t0216000-01 | Rice | nucleus | 38.73 | 26.6 |
| TraesCS4A01G079300.1 | Wheat | nucleus | 36.76 | 26.6 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 28.43 | 26.36 |
| EER92638 | Sorghum | nucleus | 38.24 | 26.26 |
| TraesCS4D01G244500.1 | Wheat | nucleus | 36.27 | 26.24 |
| TraesCS4B01G244900.1 | Wheat | nucleus | 35.78 | 26.07 |
| GSMUA_Achr5P09990_001 | Banana | cytosol, mitochondrion, nucleus | 23.53 | 23.53 |
| Zm00001d028222_P001 | Maize | nucleus | 36.76 | 23.51 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 22.06 | 21.23 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 20.59 | 21.11 |
| GSMUA_Achr4P13760_001 | Banana | nucleus | 21.08 | 20.98 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 21.57 | 20.56 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 23.04 | 20.43 |
| GSMUA_Achr9P21420_001 | Banana | nucleus | 23.04 | 20.43 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 22.55 | 19.74 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 20.1 | 18.72 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 21.08 | 17.7 |
| GSMUA_Achr11P... | Banana | nucleus | 21.08 | 16.86 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP15150_001 | EnsemblPlants:GSMUA_AchrUn_randomT15150_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG15150_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF316 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002963153 | UniProt:M0U9C4 | MapMan:15.5.15 |
Description
Putative ZOS3-05 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15150_001]
Coordinates
chrchrUn_random:+:71472165..71472779
Molecular Weight (calculated)
21724.0 Da
IEP (calculated)
8.834
GRAVY (calculated)
-0.290
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MDELATYDLA ACKKPSSAVS GIRLFGIDVS RDRGGDGGRS KSGRRFGCHY CCRHFPTSQA LGGHQNAHKR ERLRTRHVQF GPAMETGGHS VCGLSDCLRL
101: PHHPSWRASV SAGAGFFGRH GPGTQPMTGR PLLRGVPAVV RGGTGVGLIY CDRMMPLPLM QGDVWKAGGA GNDAVSCATT ATSNEYVCES MLSVSETVNL
201: DLHL
101: PHHPSWRASV SAGAGFFGRH GPGTQPMTGR PLLRGVPAVV RGGTGVGLIY CDRMMPLPLM QGDVWKAGGA GNDAVSCATT ATSNEYVCES MLSVSETVNL
201: DLHL
001: MKTYDFMNVN SFSPKERPIR LFGFEFGASH EESESKDNYN ENNESIKDDN KEKRFKCHYC FRNFPTSQAL GGHQNAHKRE RQQTKRFNLH SNAAAFFHRQ
101: QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L
101: QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L
Arabidopsis Description
GIS2Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.