Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P13760_001 | Banana | nucleus | 65.22 | 73.17 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 60.43 | 65.57 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 42.17 | 42.17 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 36.09 | 41.71 |
| GSMUA_Achr5P09990_001 | Banana | cytosol, mitochondrion, nucleus | 35.22 | 39.71 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 39.57 | 39.06 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 40.43 | 38.27 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 35.22 | 37.85 |
| Zm00001d039977_P001 | Maize | nucleus | 42.17 | 36.33 |
| Os01t0132766-01 | Rice | nucleus | 41.74 | 35.96 |
| TraesCS3A01G036000.1 | Wheat | nucleus | 40.0 | 35.8 |
| Zm00001d008562_P001 | Maize | nucleus | 41.3 | 35.32 |
| TraesCS3D01G044000.1 | Wheat | nucleus | 39.57 | 35.27 |
| HORVU3Hr1G007060.1 | Barley | nucleus | 39.57 | 35.14 |
| TraesCS3B01G048000.1 | Wheat | nucleus | 39.57 | 35.14 |
| EES02547 | Sorghum | nucleus | 41.74 | 33.8 |
| GSMUA_Achr11P... | Banana | nucleus | 35.22 | 31.76 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 26.96 | 28.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.43 | 23.04 |
| GSMUA_Achr8P22740_001 | Banana | nucleus | 23.04 | 20.87 |
| GSMUA_Achr3P07800_001 | Banana | nucleus | 19.57 | 20.45 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 22.61 | 20.0 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 20.87 | 17.39 |
| GSMUA_Achr10P... | Banana | nucleus | 19.57 | 16.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P21420_001 | EnsemblPlants:GSMUA_Achr9T21420_001 | EnsemblPlantsGene:GSMUA_Achr9G21420_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF237 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002968EC3 | UniProt:M0U2A1 | MapMan:15.5.15 |
Description
Putative ZOS1-03 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G21420_001]
Coordinates
chr9:-:26538373..26539065
Molecular Weight (calculated)
24034.8 Da
IEP (calculated)
8.168
GRAVY (calculated)
-0.618
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGMQCQAKG TTSPRLKLFG FHVSDNDNPG DGRAVVGSPT SAASASSGAS GAGGGDGRKY ECQYCCREFA NSQALGGHQN AHKKERQQMK RAQLHHHHHA
101: TSGHRSPHGT FYHQPIASAF APSPHLFSPP RSPPPTTPGP QAVGLPGNAA ASWAYYPRPA PPLHLPRGCI VPRSLPTCYS YGGDGSEGTR FYDDGRLIGG
201: PGFSGVAPAE EAAEDAYGLD LHLSLAPAGS
101: TSGHRSPHGT FYHQPIASAF APSPHLFSPP RSPPPTTPGP QAVGLPGNAA ASWAYYPRPA PPLHLPRGCI VPRSLPTCYS YGGDGSEGTR FYDDGRLIGG
201: PGFSGVAPAE EAAEDAYGLD LHLSLAPAGS
001: MEELDFSSKT TTSRLKLFGF SVDGEEDFSD QSVKTNLSSV SPERGEFPAG SSGRSGGGVR SRGGGGGGGE RKYECQYCCR EFGNSQALGG HQNAHKKERQ
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
Arabidopsis Description
GIS3Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.