Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P07800_001 | Banana | nucleus | 55.51 | 64.09 |
| GSMUA_Achr1P22000_001 | Banana | nucleus | 45.28 | 44.23 |
| HORVU7Hr1G034930.2 | Barley | nucleus | 18.9 | 44.04 |
| GSMUA_Achr10P... | Banana | nucleus | 42.13 | 39.34 |
| Zm00001d018247_P001 | Maize | nucleus | 42.52 | 38.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.92 | 37.25 |
| HORVU6Hr1G080870.1 | Barley | nucleus | 41.34 | 36.97 |
| TraesCS6D01G314600.1 | Wheat | nucleus | 41.34 | 36.84 |
| TraesCS6B01G365700.1 | Wheat | nucleus | 41.34 | 36.71 |
| GSMUA_Achr3P02080_001 | Banana | nucleus | 39.76 | 36.59 |
| Os02t0775600-01 | Rice | nucleus | 40.16 | 36.56 |
| TraesCS6A01G335100.1 | Wheat | nucleus | 40.55 | 36.52 |
| EES07621 | Sorghum | nucleus | 43.31 | 35.71 |
| OQU80598 | Sorghum | mitochondrion, nucleus, plastid | 24.02 | 35.26 |
| Bra028724.1-P | Field mustard | nucleus | 25.2 | 35.16 |
| Zm00001d044980_P001 | Maize | nucleus | 34.25 | 35.08 |
| Zm00001d052118_P001 | Maize | nucleus | 42.13 | 34.97 |
| TraesCS7A01G167000.1 | Wheat | nucleus | 32.68 | 34.44 |
| TraesCS7D01G167600.1 | Wheat | nucleus | 32.28 | 34.17 |
| CDY04997 | Canola | nucleus | 24.02 | 34.08 |
| CDY14074 | Canola | nucleus | 24.02 | 33.89 |
| TraesCS7B01G071600.1 | Wheat | nucleus | 31.5 | 33.33 |
| Zm00001d037136_P001 | Maize | nucleus | 34.65 | 33.08 |
| AT5G06650.1 | Thale cress | nucleus | 23.62 | 31.41 |
| OQU76029 | Sorghum | plastid | 36.22 | 31.4 |
| GSMUA_Achr4P13760_001 | Banana | nucleus | 20.87 | 25.85 |
| GSMUA_Achr4P06770_001 | Banana | nucleus | 20.87 | 25.0 |
| GSMUA_Achr8P31650_001 | Banana | nucleus | 18.9 | 24.12 |
| GSMUA_Achr5P09990_001 | Banana | cytosol, mitochondrion, nucleus | 19.29 | 24.02 |
| HORVU7Hr1G034940.1 | Barley | plastid | 11.81 | 24.0 |
| GSMUA_Achr8P18340_001 | Banana | nucleus | 21.26 | 23.48 |
| GSMUA_Achr9P21420_001 | Banana | nucleus | 20.87 | 23.04 |
| GSMUA_Achr3P21070_001 | Banana | nucleus | 19.29 | 21.03 |
| GSMUA_Achr7P11950_001 | Banana | nucleus | 17.32 | 20.56 |
| GSMUA_Achr2P07210_001 | Banana | nucleus | 18.9 | 19.75 |
| GSMUA_Achr2P14620_001 | Banana | nucleus | 15.75 | 18.26 |
| GSMUA_Achr11P... | Banana | nucleus | 17.32 | 17.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P22740_001 | EnsemblPlants:GSMUA_Achr8T22740_001 | EnsemblPlantsGene:GSMUA_Achr8G22740_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF238 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | UniParc:UPI0002949CD5 | UniProt:M0TSS7 | MapMan:15.5.15 | : | : |
Description
Putative ZOS2-17 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G22740_001]
Coordinates
chr8:+:27322931..27323776
Molecular Weight (calculated)
27397.5 Da
IEP (calculated)
8.521
GRAVY (calculated)
-0.706
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEQETHNFM KVSVDSFSEL PFIRPGPARE NASHTSPAIR LFGIDFATDP DASQDGPSSS RKFECHYCCR KFPTSQALGG HQNAHKRERQ HAKRSHLHSA
101: MASQHYHHHH HPSFIADGHV YGYLDYRHLS SFPSASRFDH PPPTHYPSWT SHTGSVTNPA ARFYGGLGSA SQLINGSPLP GPWRMPVHGS TAGLQGNHPP
201: ALPSFGGRDA RKMAVEGTGG VGSSSSSSSS LASPNEQGGF DSGSKNSLSL DLHL
101: MASQHYHHHH HPSFIADGHV YGYLDYRHLS SFPSASRFDH PPPTHYPSWT SHTGSVTNPA ARFYGGLGSA SQLINGSPLP GPWRMPVHGS TAGLQGNHPP
201: ALPSFGGRDA RKMAVEGTGG VGSSSSSSSS LASPNEQGGF DSGSKNSLSL DLHL
001: MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
101: FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL
201: WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH VSLDLHL
Arabidopsis Description
ZFP8Zinc finger protein 8 [Source:UniProtKB/Swiss-Prot;Acc:P93751]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.