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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04997 Canola nucleus 71.73 76.54
CDY14074 Canola nucleus 71.2 75.56
Bra028724.1-P Field mustard nucleus 71.73 75.27
HORVU7Hr1G034930.2 Barley nucleus 18.85 33.03
AT3G58070.1 Thale cress nucleus 37.7 28.46
AT2G41940.1 Thale cress nucleus 35.08 26.07
GSMUA_Achr3P07800_001 Banana nucleus 27.75 24.09
OQU80598 Sorghum mitochondrion, nucleus, plastid 21.47 23.7
GSMUA_Achr8P22740_001 Banana nucleus 31.41 23.62
Os02t0775600-01 Rice nucleus 34.03 23.3
Zm00001d018247_P001 Maize nucleus 34.55 23.24
TraesCS6B01G365700.1 Wheat nucleus 32.98 22.03
Zm00001d044980_P001 Maize nucleus 28.27 21.77
TraesCS6A01G335100.1 Wheat nucleus 31.94 21.63
HORVU6Hr1G080870.1 Barley nucleus 31.94 21.48
EES07621 Sorghum nucleus 34.03 21.1
Zm00001d037136_P001 Maize nucleus 29.32 21.05
TraesCS6D01G314600.1 Wheat nucleus 31.41 21.05
TraesCS7D01G167600.1 Wheat nucleus 26.18 20.83
Zm00001d052118_P001 Maize nucleus 32.98 20.59
TraesCS7B01G071600.1 Wheat nucleus 25.65 20.42
TraesCS7A01G167000.1 Wheat nucleus 25.65 20.33
OQU76029 Sorghum plastid 29.84 19.45
AT1G10480.1 Thale cress nucleus 20.94 18.96
AT1G68360.1 Thale cress nucleus 20.94 16.39
AT1G67030.1 Thale cress nucleus 16.23 15.74
HORVU7Hr1G034940.1 Barley plastid 5.76 8.8
Protein Annotations
MapMan:15.5.15Gene3D:3.30.160.60EntrezGene:830553ProteinID:AED91046.1ArrayExpress:AT5G06650EnsemblPlantsGene:AT5G06650
RefSeq:AT5G06650TAIR:AT5G06650RefSeq:AT5G06650-TAIR-GEnsemblPlants:AT5G06650.1TAIR:AT5G06650.1ProteinID:BAB11414.1
ProteinID:BAH30578.1Symbol:GIS2GO:GO:0003674GO:GO:0003676GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009719GO:GO:0009735GO:GO:0009736GO:GO:0009739GO:GO:0009740
GO:GO:0009987GO:GO:0010026GO:GO:0030154GO:GO:0046872InterPro:IPR013087RefSeq:NP_196283.1
PO:PO:0000037PO:PO:0000084PO:PO:0000229PO:PO:0001078PO:PO:0001081PO:PO:0004507
PO:PO:0007611PO:PO:0009009PO:PO:0009010PO:PO:0009046ScanProsite:PS00028PFscan:PS50157
PANTHER:PTHR26374PANTHER:PTHR26374:SF316UniProt:Q9FG05SUPFAM:SSF57667UniParc:UPI00000A0281InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type:::::
Description
GIS2Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05]
Coordinates
chr5:+:2043419..2044200
Molecular Weight (calculated)
22466.9 Da
IEP (calculated)
9.440
GRAVY (calculated)
-1.059
Length
191 amino acids
Sequence
(BLAST)
001: MKTYDFMNVN SFSPKERPIR LFGFEFGASH EESESKDNYN ENNESIKDDN KEKRFKCHYC FRNFPTSQAL GGHQNAHKRE RQQTKRFNLH SNAAAFFHRQ
101: QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.