Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67406 | Canola | nucleus | 80.57 | 82.52 |
| Bra031715.1-P | Field mustard | nucleus | 79.62 | 82.35 |
| CDY20629 | Canola | nucleus | 79.15 | 81.07 |
| CDY34889 | Canola | nucleus | 77.25 | 80.69 |
| Bra018438.1-P | Field mustard | nucleus | 77.73 | 80.0 |
| CDY20951 | Canola | nucleus | 77.73 | 80.0 |
| VIT_01s0026g00850.t01 | Wine grape | nucleus | 39.34 | 33.6 |
| PGSC0003DMT400040327 | Potato | nucleus | 37.44 | 31.85 |
| KRH74690 | Soybean | nucleus | 36.02 | 31.54 |
| KRH69467 | Soybean | nucleus | 36.02 | 30.89 |
| Solyc05g006310.1.1 | Tomato | nucleus | 36.49 | 30.8 |
| VIT_14s0066g01860.t01 | Wine grape | nucleus | 29.38 | 25.83 |
| AT1G67030.1 | Thale cress | nucleus | 21.33 | 22.84 |
| AT5G06650.1 | Thale cress | nucleus | 18.96 | 20.94 |
| AT1G68360.1 | Thale cress | nucleus | 23.22 | 20.08 |
| AT2G41940.1 | Thale cress | nucleus | 19.43 | 15.95 |
| AT3G58070.1 | Thale cress | nucleus | 18.48 | 15.41 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:837588 | UniProt:A0A178W5E9 | ProteinID:AAD39569.1 | EMBL:AB493446 |
| ProteinID:AEE28584.1 | ArrayExpress:AT1G10480 | EnsemblPlantsGene:AT1G10480 | RefSeq:AT1G10480 | TAIR:AT1G10480 | RefSeq:AT1G10480-TAIR-G |
| EnsemblPlants:AT1G10480.1 | TAIR:AT1G10480.1 | EMBL:AY086302 | Unigene:At.1643 | EMBL:BT024840 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009740 | GO:GO:0009873 | GO:GO:0009987 |
| GO:GO:0010026 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0044212 |
| GO:GO:0046872 | GO:GO:0048510 | GO:GO:0048766 | GO:GO:0048767 | InterPro:IPR013087 | EMBL:L39648 |
| RefSeq:NP_172518.1 | ProteinID:OAP13284.1 | PFAM:PF13912 | PO:PO:0000230 | PO:PO:0007611 | PO:PO:0009005 |
| PO:PO:0009046 | PO:PO:0009049 | PO:PO:0020100 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF252 | UniProt:Q39264 | SUPFAM:SSF57667 | UniParc:UPI000013C3B6 | Symbol:ZFP5 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
Coordinates
chr1:+:3449567..3451226
Molecular Weight (calculated)
23591.5 Da
IEP (calculated)
9.153
GRAVY (calculated)
-0.811
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.