Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74690 | Soybean | nucleus | 89.84 | 91.7 |
| Bra031715.1-P | Field mustard | nucleus | 30.49 | 36.76 |
| CDY34889 | Canola | nucleus | 30.08 | 36.63 |
| CDY67406 | Canola | nucleus | 30.49 | 36.41 |
| Bra018438.1-P | Field mustard | nucleus | 30.08 | 36.1 |
| CDY20951 | Canola | nucleus | 30.08 | 36.1 |
| AT1G10480.1 | Thale cress | nucleus | 30.89 | 36.02 |
| CDY20629 | Canola | nucleus | 30.08 | 35.92 |
| VIT_14s0066g01860.t01 | Wine grape | nucleus | 34.96 | 35.83 |
| KRH46944 | Soybean | nucleus | 19.92 | 28.49 |
| KRH01734 | Soybean | nucleus | 20.33 | 27.93 |
| Solyc03g113890.1.1 | Tomato | nucleus | 24.39 | 26.09 |
| PGSC0003DMT400062866 | Potato | nucleus | 23.17 | 24.78 |
| KRH37026 | Soybean | nucleus | 14.23 | 24.14 |
| KRH68238 | Soybean | nucleus | 15.85 | 23.49 |
| KRH11994 | Soybean | nucleus | 17.48 | 23.24 |
| KRG96499 | Soybean | nucleus | 16.67 | 21.13 |
| KRG90856 | Soybean | nucleus | 23.98 | 21.0 |
| KRH35924 | Soybean | nucleus | 23.98 | 20.85 |
| KRG95435 | Soybean | nucleus | 20.33 | 19.61 |
| KRH67106 | Soybean | nucleus | 20.33 | 19.3 |
| KRH38054 | Soybean | nucleus | 21.14 | 16.94 |
Protein Annotations
| EntrezGene:100799857 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02000716 | EnsemblPlantsGene:GLYMA_02G029400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1JBX7 | InterPro:IPR013087 | EnsemblPlants:KRH69467 | ProteinID:KRH69467 | ProteinID:KRH69467.1 | PFAM:PF13912 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF252 | SUPFAM:SSF57667 | UniParc:UPI0001E239B5 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:2698045..2699137
Molecular Weight (calculated)
27921.7 Da
IEP (calculated)
6.156
GRAVY (calculated)
-1.056
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKDIIDLSP TWDCDNGNST EKRLRLFGFE LNPSSKEGCA KESGEGDESV NSSNSASSGG DKTVQEKTSA NDPDERKFEC QYCYKEFANS QALGGHQNAH
101: KKERMKKKRL QLQSINRYLQ HPFQSNHGFA YPSDTPWFYD PSTYNNNSEF TLCEEPQISF NSNSVLDSNF SNDQKTSWYS LASHPSNIQQ DTCMFTFSSN
201: ASNNNNSPFI FKPCHFPASN QNHNKTLDLQ LGLNLESNTR SSLRRM
101: KKERMKKKRL QLQSINRYLQ HPFQSNHGFA YPSDTPWFYD PSTYNNNSEF TLCEEPQISF NSNSVLDSNF SNDQKTSWYS LASHPSNIQQ DTCMFTFSSN
201: ASNNNNSPFI FKPCHFPASN QNHNKTLDLQ LGLNLESNTR SSLRRM
001: MEELDFSSKT TTSRLKLFGF SVDGEEDFSD QSVKTNLSSV SPERGEFPAG SSGRSGGGVR SRGGGGGGGE RKYECQYCCR EFGNSQALGG HQNAHKKERQ
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
101: QLKRAQLQAT RNAAANFSNA GSASQFLRNP IVSAFAPPPH LLSSSAVPQP MGGPWMYLPR VSPSQLHVSH GCVIQDGSGG AGAGGFSYEY GARDSGFGVV
201: GAQMRHVQAH GPRPSVNGFS REVGTTFDDG LGLDLHLSLA PAGH
Arabidopsis Description
GIS3Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.