Factsheet for Bra018438.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20951	Canola	nucleus	100.0	100.0
Bra031715.1-P	Field mustard	nucleus	81.95	82.35
AT1G10480.1	Thale cress	nucleus	80.0	77.73
VIT_01s0026g00850.t01	Wine grape	nucleus	40.0	33.2
KRH74690	Soybean	nucleus	35.61	30.29
PGSC0003DMT400040327	Potato	nucleus	36.59	30.24
KRH69467	Soybean	nucleus	36.1	30.08
Solyc05g006310.1.1	Tomato	nucleus	36.1	29.6
VIT_14s0066g01860.t01	Wine grape	nucleus	29.27	25.0
Bra004200.1-P	Field mustard	nucleus	20.0	21.47
Bra028724.1-P	Field mustard	nucleus	18.54	20.88
Bra033944.1-P	Field mustard	nucleus	22.44	19.83
Bra004300.1-P	Field mustard	nucleus	22.44	19.49
Bra016900.1-P	Field mustard	nucleus	20.0	16.14
Bra000245.1-P	Field mustard	nucleus	19.51	16.13
Bra003317.1-P	Field mustard	nucleus	18.54	16.1
Bra004660.1-P	Field mustard	nucleus	18.54	15.2
Bra007378.1-P	Field mustard	nucleus	17.56	14.23

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EnsemblPlantsGene:Bra018438	EnsemblPlants:Bra018438.1	EnsemblPlants:Bra018438.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:M4DPJ7	PFAM:PF13912	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF252	SUPFAM:SSF57667	UniParc:UPI0002547F3F	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

AT1G10480 (E=8e-075) ZFP5 | ZFP5 (ZINC FINGER PROTEIN 5); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA05:-:8222790..8223407

Molecular Weight (calculated)

22737.8 Da

IEP (calculated)

10.067

GRAVY (calculated)

-0.684

Length

205 amino acids

Sequence
(BLAST)

001: MSRTGESSSG SSSDRTIKLF GFELISGGRS PEVTTADSVS SSTKNTTSFI AKRLECQYCG KEFANSQALG GHQNAHKKER LKKKRLQLQA RRASIGYYLT
101: SHHQPITTSF QRPYKTPSYC AFSSMHVNNQ MGLFNDEWSP ISSQISFGNK DMSQDIIEQN GEMGKVYPGV RQNMIQFQRD LTSPSGPKRS IKSLDLHLGI
201: AGDTV

Best Arabidopsis Sequence Match ( AT1G10480.1 )
(BLAST)

001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A

Arabidopsis Description

ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.