Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040327 | Potato | nucleus | 93.2 | 93.95 |
| Bra031715.1-P | Field mustard | nucleus | 30.4 | 37.25 |
| CDY34889 | Canola | nucleus | 30.0 | 37.13 |
| CDY20629 | Canola | nucleus | 30.4 | 36.89 |
| CDY67406 | Canola | nucleus | 30.4 | 36.89 |
| AT1G10480.1 | Thale cress | nucleus | 30.8 | 36.49 |
| Bra018438.1-P | Field mustard | nucleus | 29.6 | 36.1 |
| CDY20951 | Canola | nucleus | 29.6 | 36.1 |
| Solyc03g113890.1.1 | Tomato | nucleus | 26.0 | 28.26 |
| Solyc05g009180.1.1 | Tomato | nucleus | 24.0 | 27.91 |
| Solyc05g009170.1.1 | Tomato | nucleus | 21.6 | 25.47 |
| Solyc01g060420.2.1 | Tomato | nucleus | 14.8 | 24.03 |
| Solyc03g058160.2.1 | Tomato | nucleus | 17.2 | 19.55 |
| Solyc10g078970.1.1 | Tomato | nucleus | 16.0 | 19.51 |
| Solyc10g080600.1.1 | Tomato | nucleus | 17.6 | 18.8 |
| Solyc10g078990.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 16.8 | 18.1 |
Protein Annotations
| EnsemblPlants:Solyc05g006310.1.1 | EnsemblPlantsGene:Solyc05g006310.1 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF252 | PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | SUPFAM:SSF57667 | UniParc:UPI00027673C3 | UniProt:K4BWF8 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr5:-:960800..961552
Molecular Weight (calculated)
28395.6 Da
IEP (calculated)
8.761
GRAVY (calculated)
-1.108
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDVVSSTF QSPSSNINGE NYHESSSKSC IENNNNNNKK LKIFGFELID NPKRSPKKVQ NNSSKEDQES VNSSSASTVS SGNIHHNQEK ISSNHEEIMK
101: KFECQYCLKQ FANSQALGGH QNAHKKERMR KKRLQLQARK ASLSCYLQPF HNQNYNNNNN NIINYQFHDP QFNVYEESQI SFNPNYDYQV SSEGGGTNWP
201: FHQDSNNCTF TLTHGGNNYM KPPSTILDNS SSTKQKSSCK HLDLQLGLSL
101: KFECQYCLKQ FANSQALGGH QNAHKKERMR KKRLQLQARK ASLSCYLQPF HNQNYNNNNN NIINYQFHDP QFNVYEESQI SFNPNYDYQV SSEGGGTNWP
201: FHQDSNNCTF TLTHGGNNYM KPPSTILDNS SSTKQKSSCK HLDLQLGLSL
001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A
Arabidopsis Description
ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.