Factsheet for Bra031715.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67406	Canola	nucleus	99.02	98.06
CDY34889	Canola	nucleus	95.59	96.53
Bra018438.1-P	Field mustard	nucleus	82.35	81.95
AT1G10480.1	Thale cress	nucleus	82.35	79.62
VIT_01s0026g00850.t01	Wine grape	nucleus	40.69	33.6
PGSC0003DMT400040327	Potato	nucleus	37.75	31.05
KRH74690	Soybean	nucleus	36.27	30.71
KRH69467	Soybean	nucleus	36.76	30.49
Solyc05g006310.1.1	Tomato	nucleus	37.25	30.4
VIT_14s0066g01860.t01	Wine grape	nucleus	30.88	26.25
Bra004200.1-P	Field mustard	nucleus	21.08	22.51
Bra033944.1-P	Field mustard	nucleus	22.55	19.83
Bra028724.1-P	Field mustard	nucleus	17.65	19.78
Bra004300.1-P	Field mustard	nucleus	22.55	19.49
Bra003317.1-P	Field mustard	nucleus	18.63	16.1
Bra016900.1-P	Field mustard	nucleus	19.61	15.75
Bra000245.1-P	Field mustard	nucleus	18.63	15.32
Bra007378.1-P	Field mustard	nucleus	18.63	15.02
Bra004660.1-P	Field mustard	nucleus	18.14	14.8

Protein Annotations

EnsemblPlants:Bra031715.1	EnsemblPlants:Bra031715.1-P	EnsemblPlantsGene:Bra031715	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF252
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	UniParc:UPI00025431B7
UniProt:M4ESD7	MapMan:15.5.15	:	:	:	:

Description

AT1G10480 (E=1e-075) ZFP5 | ZFP5 (ZINC FINGER PROTEIN 5); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA09:-:35089628..35090242

Molecular Weight (calculated)

22930.9 Da

IEP (calculated)

9.486

GRAVY (calculated)

-0.773

Length

204 amino acids

Sequence
(BLAST)

001: MSRTCESSSG SFSDKTLKLF GFELISGNRS QEVTTTDSVS SSTNNTAPFK AKRLECQYCG KEFANSQALG GHQNAHKKER LKKKRLQLQA RRASIGYYLT
101: THQQPITKSF ERQCKTPSYC AFSSMHVNSQ IGVFNEEWAS MSSQISFGNK DTCQDLNEQN GEMGKMYGVR QNMIQFQRDL TSRSDSKRSI QSLDLHLGFA
201: GDMA

Best Arabidopsis Sequence Match ( AT1G10480.1 )
(BLAST)

001: MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS
101: IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL
201: DLHLGFAGDA A

Arabidopsis Description

ZFP5Zinc finger protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39264]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.